Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g2917 ATGGAGAAGCAGAACAAAATTAATATTAAGCTTGAGAAATTAAACACAATACTCATAAAACCATCAAAACCAACACCATTACATCTTCAAACTTTCAAACTCTCATTACTAGATCAATTTTCTCCAAATTATCATACCAACATGACTTTCTTCTACCCAAATCACAACAACAATAACAATACCAACAATCATTTTTCTGATTTTTCCAATAAATCAAAAATTCTTCAAAACTCACTTGCTCAAACATTATCCCATTTTTACCCTCTCGCCGGCCGTCTCCATGACGCCACCACCATTCACTGTAACGACGACGGCGTTTTCTTCATCGAATCACGATCAACCACCACTCTCTCCCAAATTCTCACCAATCCTAATTTCGATGCACTAGAATGCTTCGTCCCAACCACTGAGGAAAAACGAAACATGCTGTTATTACTCCGATTCACCTTGTTCAGATGCGGTTCCACCGCAATTACCACATTTGTCACACACAAGATCGTTGAACTTAACACACTCATAATTTTTCTCAACACTTGGGCTGCCATCACCACCGGAAATGAAATTCCACTCCCTGATTTAACAGTCGCCGCCGCTCTTTTTCCTCCGAGAGAAGTTCCCGACGTGTCTGGTTCCGTTAAAAATTCCAATGCAAAATTCACTACTAGAAGATTCATTTTCAAAGCATCCAAAATAGAAGAACTAAAGATAAAAATCAAAAACAAATTTGAATTTCATCCTTCTAGGGTAGAGGTTGTTTTAGCTCTGATTTGGAAATGTGCTCTTTCGGCATCAATAGCAGTTTCTGGTTCCAAAACGACGTCGTTTAGGCGTTCGATTTTGTTCCAAGCAATAGACATCCGTACACGTATGAACCCCGCCGTACCAGAAACTGCAGTTGGGAACTTGGCTTGGCCGTTTTGGGTGACGGTTGAAGAAGAAAGCCACGTGGCAATAGATGAGATGGTGAAAAGAATGAGGAAGGGTAAAATGGACTTTATAGAGAATAAAGCAGAGAGGTTTAAAGGGGAAGGTGGGTTTAAGGTTGTGATGGAGAATTTGAAAGAGAGGGTTGAGATTTTGAAAAGGAATAATGAGAATAAGGGTAGTTTGGTAGTTTACAACAGTTCAAGTTGGTGTAATTATCCATTGCTTGAGTTTGATTTTGGGTGGGGCAAACCTGTGTGGTGTAGTAGTGTGAATAATAATTTTGCGACTAATTTAATTGTTTTGATGGATACAAAAAATGGTGGTGGAATTGAAGCTTTCGTTACTCTTGTTGAAGATGAGATGAAATTGTTTGAACAAAATCAGGAGCTGCTACACTATGCTGTGCTTAATCCTACAATTCTTATTTCAACTTCAAAGCTATAA 1371 0.3873 MEKQNKINIKLEKLNTILIKPSKPTPLHLQTFKLSLLDQFSPNYHTNMTFFYPNHNNNNNTNNHFSDFSNKSKILQNSLAQTLSHFYPLAGRLHDATTIHCNDDGVFFIESRSTTTLSQILTNPNFDALECFVPTTEEKRNMLLLLRFTLFRCGSTAITTFVTHKIVELNTLIIFLNTWAAITTGNEIPLPDLTVAAALFPPREVPDVSGSVKNSNAKFTTRRFIFKASKIEELKIKIKNKFEFHPSRVEVVLALIWKCALSASIAVSGSKTTSFRRSILFQAIDIRTRMNPAVPETAVGNLAWPFWVTVEEESHVAIDEMVKRMRKGKMDFIENKAERFKGEGGFKVVMENLKERVEILKRNNENKGSLVVYNSSSWCNYPLLEFDFGWGKPVWCSSVNNNFATNLIVLMDTKNGGGIEAFVTLVEDEMKLFEQNQELLHYAVLNPTILISTSKL* 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g2917 456 Pfam Transferase family 10 439 - -
Tpr2g2917 456 Gene3D - 217 443 IPR023213 -
Tpr2g2917 456 Gene3D - 8 209 IPR023213 -
Tpr2g2917 456 PANTHER F21J9.9 8 450 - -
Tpr2g2917 456 Coils Coil 350 370 - -
Tpr2g2917 456 PANTHER VINORINE SYNTHASE-RELATED 8 450 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g2917 Tpr-Chr2 33631080 33632653 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g2917 6 435 Monolignol Biosynthesis Gene Families AT5G48930 22.436 9.74e-26 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g2917 - - mtr:MTR_2g007880 612.453