Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g2916 ATGGAGAAGCAGAACAAAATTAATATTAAGCTTGAGAAATTAAACACAATACTCATAAAACCATCAAAACCAACACCATTACATCTTCAAACTTTCAAACTCTCATTACTAGATCAATTTTCTCCTAATTATCATACCAACATGACTTTCTTCTACCCAAATCACAACAACAATAACAATACCAACAATCATTTTTCTGATTTTTCCAATAAATCAAAAATTCTTCAAAACTCACTTTCTCAAACATTATCCCATTTTTACCCTCTCGCCGGCCGTCTCCATGACGCCACCACCATTCACTGTAACGACGACGGCGTTTTCTTCATCGAATCACGATCAACCACCACTCTCTCCCAAATTCTCACCAATCCTAATTTCGATGCACTAGAATGCTTCGTCCCAACCACTGAGGAAAAACGAAACATGCTGTTATTACTCCGATTCACCTTGTTCAGATGCGGTTCCACCGCAATTACCACATTTGTCACACACAAGATCGTTGAACTTAACACACTCATAATTTTTCTCAACACTTGGGCTGCCATCACCACCGGAAATGAAATTCCACTCCCTGATTTAACAGTCGCCGCCGCTCTTTTTCCTCCGAGAGAAGTTCCCGACTTGTCTGGTTCCGTTAAAAATTCCAATGCAAAATTCACTACTAGAAGATTCATTTTCAAAGCATCCAAAATAGAAGAACTAAAGATAAAAATCAAAAACAAATTTGAATTTCATCCTTCTAGGGTAGAGGTTGTTTTAGCTCTGATTTGGAAATGTGCTCTTTCGGCATCAATAGCAGTTTCTGGTTCCAAAACGACGTCGTTTAAGCGTTCGATTTTGTTCCAAGCAGTGAACCTCCGTACACGGATGGAACCCACCGTACCAGAAACTGCAGTTGGAAATGTGGTTTGGCCGTTTTGGGTGACGGTTGAAGAAGAAAGCCACGTGGCAATAGATGAGATGGTGAAAAGAATGAGGAAGGGTATAATGGACTTTATAGAGAATAAAGCAGAGAGGTTTAAAGAGGAAGGTGGGTTTAAGGTTGTGATGGAGAGTTTGAAAGAGAGAGTAGAGATTTTGAAGGGAAATGAGAATGAGGGTAGTTTGGTAATTTACAAATGTTCAAGTTGGTGTAAATTTCCATTGCTTGAATTTGATTTCGGTTGGGGAAAACCTGTGTGGAGTTGTAGTGTGAATAATTTGGTGAGTAATACAATTGCTTTGATGGATACAAAAGATGGTGGTGGAGTTGAAGCTTTTGTTACTCTTGATGAAGATGAGATGAAATTGTTTGAACAAAATGAGGAGCTGCTATACTATGCTTTGCTTAATCCTACAATTCTTATTTGA 1350 0.3867 MEKQNKINIKLEKLNTILIKPSKPTPLHLQTFKLSLLDQFSPNYHTNMTFFYPNHNNNNNTNNHFSDFSNKSKILQNSLSQTLSHFYPLAGRLHDATTIHCNDDGVFFIESRSTTTLSQILTNPNFDALECFVPTTEEKRNMLLLLRFTLFRCGSTAITTFVTHKIVELNTLIIFLNTWAAITTGNEIPLPDLTVAAALFPPREVPDLSGSVKNSNAKFTTRRFIFKASKIEELKIKIKNKFEFHPSRVEVVLALIWKCALSASIAVSGSKTTSFKRSILFQAVNLRTRMEPTVPETAVGNVVWPFWVTVEEESHVAIDEMVKRMRKGIMDFIENKAERFKEEGGFKVVMESLKERVEILKGNENEGSLVIYKCSSWCKFPLLEFDFGWGKPVWSCSVNNLVSNTIALMDTKDGGGVEAFVTLDEDEMKLFEQNEELLYYALLNPTILI* 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g2916 449 Gene3D - 8 209 IPR023213 -
Tpr2g2916 449 PANTHER VINORINE SYNTHASE-RELATED 8 448 - -
Tpr2g2916 449 Gene3D - 217 439 IPR023213 -
Tpr2g2916 449 Pfam Transferase family 10 437 - -
Tpr2g2916 449 PANTHER F21J9.9 8 448 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g2916 Tpr-Chr2 33626400 33646446 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g2916 6 433 Monolignol Biosynthesis Gene Families AT5G48930 22.727 1.83e-26 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g2916 - - mtr:MTR_2g007880 659.833