Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g2909 ATGATGATGATGATGGAGAATTTGTGCAATGTAATGCAAGGTTTAAAGCCAACTTTGTTAATGATAATGGTGCAAATAGCATTTGCTGGTGTTAATCTTCTTTACAAGCTTGCTGTTAATGATGGCATGAACTTAAGGATTGTTGTTGCTTACCGTTTTATATTTGCAACTGCTTTCATTGCTCCTCTTGCTTTCTTTCTTGAAAGGAAGAAGAGGACAAAGATGACTTGGACGATACTGTTTCAGTCTTTTCTTTGCGGTTTGTTTGGAGGAGCATTAGCTCAAAACTTCCACTTAGAAGCCATGGCTTTAACTTCGGTAACATTTACATCCGCAATGGCTAACCTTGTGCCTGCTGTAACCTTTATCATGGCCCTTTCCTTTGGTATGGAAAAATTAAATTTGAGAACGAAAGCAGGGAAGGCAAAGATAATAGGTACAATAACTGGAATTGGTGGGGCAATGATATTGACATTTGTTAAAGGCATTGAAATCAAGATAGGTTCGTTTCACTTAAACCTTTTGCATCACAAAAACGGCGTCGTTGGATCGAACACACAAGCTACTATATCCACTGGTAATGCCATTTTGGGCTCTATATGTGCCTTGGCCAGTACCATCTCTTATGCATTATGGCTTATTATTCATGCAAAATTTAGTGAAAAGTACCCAACTCATTACTCAAGCACAGCATTGATGTCATTTTGGGCGTCACTAATTTCCATTGTGTTTGCTCTATGCTTTGAAAGGGATTTAAGTGAATGGAAGTTGGGTTGGAATATTAGGCTAATAACTGTTGCTTATGCGGGTATAGTGGTTTCAGGAGTAATGATAGCTGTAACTTCATGGTGTGTGCATATGAGAGGTCCATTGTTTGCCTCTATTTTTAACCCTCTAATGCTTGTTATTGTGGCCTTGGCTAGTTGTACCATGTTGAATGAGAAGCTATACCTTGGAACCATTATTGGAGCAATGTTAATTGTATGTGGGTTGTATGTGGTTTTGTGGGGTAAAAGTGAAGAGATGAAGAAAAAAAACCAATTAGTGCCATCACAAAGCTCTAATAAATTTGGCACAGTTGATATAGTTGTAGAAGATAAAAACAACCATAATATTAGCAATGGTCAATCTCAAAGTAAATAA 1143 0.3753 MMMMMENLCNVMQGLKPTLLMIMVQIAFAGVNLLYKLAVNDGMNLRIVVAYRFIFATAFIAPLAFFLERKKRTKMTWTILFQSFLCGLFGGALAQNFHLEAMALTSVTFTSAMANLVPAVTFIMALSFGMEKLNLRTKAGKAKIIGTITGIGGAMILTFVKGIEIKIGSFHLNLLHHKNGVVGSNTQATISTGNAILGSICALASTISYALWLIIHAKFSEKYPTHYSSTALMSFWASLISIVFALCFERDLSEWKLGWNIRLITVAYAGIVVSGVMIAVTSWCVHMRGPLFASIFNPLMLVIVALASCTMLNEKLYLGTIIGAMLIVCGLYVVLWGKSEEMKKKNQLVPSQSSNKFGTVDIVVEDKNNHNISNGQSQSK* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g2909 380 Pfam EamA-like transporter family 197 335 IPR000620 GO:0016020|GO:0016021
Tpr2g2909 380 Pfam EamA-like transporter family 17 157 IPR000620 GO:0016020|GO:0016021
Tpr2g2909 380 SUPERFAMILY Multidrug resistance efflux transporter EmrE 51 148 - -
Tpr2g2909 380 PANTHER WAT1-RELATED PROTEIN 15 366 IPR030184 GO:0016021|GO:0022857
Tpr2g2909 380 PANTHER WAT1-RELATED PROTEIN 15 366 - -
Tpr2g2909 380 SUPERFAMILY Multidrug resistance efflux transporter EmrE 238 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g2909 Tpr-Chr2 33562650 33566634 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g2909 5 366 Nodulin-like Gene Family AT1G68170 42.541 1.13e-97 293
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g2909 - - gmx:100787839 521.546