Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g2908 ATGATGAAGGAGAATTTATGCAATGTAGTACAAGGTTTGAAGCCAACGTTGTTAATGGTTATGGTGCAAATAGCATTTGCTGGTGTTAATATTCTCTACAAACTTGCTGTTAATGATGGCATGAATTTAAGGATTGTTGTTGCTTACCGTTTTATATTTGCAACTGCTTTCATTGCTCCACTTGCTTTCTTTCTTGAAAGGAAGAAGAGGACAAAGATGACTTGGATGGTAATGTTCCAGTCTTTTCTCTGTGGTTTGTTTGGAGGATCATTATGTCAAAACTTCTACTTAGAAGCCCTGTCTTTAACCTCAGCAACATTTGCAACCGCAATGGCCAACCTTATACCAGCATTAACCTTTATCATGGCCGTTTCCTTGAGGATGGAGAAATTAAATTTGAGAACAAAAGCAGGGAAGGCAAAGATAATAGGTACAATGAGTGGAATTTGTGGGGCAATGGTATTGACATTTGTTAAAGGTATTGAAATCAAGATAGGTTCATTTCACTTAAACCTTTTGCATCACCAAAACGGTGTCGGATTGCACCCACATGCTACTACTATATCCAAAGGTAATACACTTTTGGGCTCTCTGTGTGCCTTGGCTAGTTCCATCTCTTATTCATCCTGGCTTATTATTAATGCAAAGATGAGTGAAAAGTATCCAACTCATTACTCAAGCACAGCATTGATGACATTTTGGTCATCACTAATTTCCATTGTGTTTGCTCTATGCTTTGAAAGGGATTTTAGTGCATGGAGGTTAGGTTGGAATATTAGGCTACTAACTGTTGCTTATGCGGGTATAGTGGTTTCAGGAGCAATGATAGTTGTAACTTCATGGGTTGTACACTTGAGAGGTCCATTGTTTGCCTCTGTTTTTAACCCTCTCATGCTTGTCATTGTGGCCTTTGCTAGTTGTACCATGTTGAATGAGAAGCTATATCTTGGAACCATTATTGGAGCAGTTTTGATTGTATGTGGCTTGTATACGGTTGTATGGGGTAAGAGTAAAGAGAAGAAGAAAAATAATCAATTAGTGCCATCACAAAGCTCCAATGAATTTAACACAGTTGAAGTAGTTGTGAGGCATGTAGTAGAGGATAAAAGCAACCATAATAATAGCAATGATGAAACTCAAGGTAATAATACTTTACAAGTACATGAACATGAACATAAACATGAAGAGCAAAATCATGAACATGTACAAGATCAAGAAAAAGGAGACGAAATTGACCATCATGACTAA 1248 0.3742 MMKENLCNVVQGLKPTLLMVMVQIAFAGVNILYKLAVNDGMNLRIVVAYRFIFATAFIAPLAFFLERKKRTKMTWMVMFQSFLCGLFGGSLCQNFYLEALSLTSATFATAMANLIPALTFIMAVSLRMEKLNLRTKAGKAKIIGTMSGICGAMVLTFVKGIEIKIGSFHLNLLHHQNGVGLHPHATTISKGNTLLGSLCALASSISYSSWLIINAKMSEKYPTHYSSTALMTFWSSLISIVFALCFERDFSAWRLGWNIRLLTVAYAGIVVSGAMIVVTSWVVHLRGPLFASVFNPLMLVIVAFASCTMLNEKLYLGTIIGAVLIVCGLYTVVWGKSKEKKKNNQLVPSQSSNEFNTVEVVVRHVVEDKSNHNNSNDETQGNNTLQVHEHEHKHEEQNHEHVQDQEKGDEIDHHD* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g2908 415 MobiDBLite consensus disorder prediction 368 415 - -
Tpr2g2908 415 MobiDBLite consensus disorder prediction 384 415 - -
Tpr2g2908 415 Coils Coil 385 405 - -
Tpr2g2908 415 PANTHER WAT1-RELATED PROTEIN 14 371 - -
Tpr2g2908 415 Pfam EamA-like transporter family 195 333 IPR000620 GO:0016020|GO:0016021
Tpr2g2908 415 Pfam EamA-like transporter family 15 155 IPR000620 GO:0016020|GO:0016021
Tpr2g2908 415 SUPERFAMILY Multidrug resistance efflux transporter EmrE 236 339 - -
Tpr2g2908 415 SUPERFAMILY Multidrug resistance efflux transporter EmrE 49 144 - -
Tpr2g2908 415 PANTHER WAT1-RELATED PROTEIN 14 371 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g2908 Tpr-Chr2 33551841 33556125 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g2908 13 356 Nodulin-like Gene Family AT1G25270 42.442 1.02e-92 281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g2908 - - gmx:100787839 530.406