Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g2880 ATGGAGACAGTGACTTCAAGTTTTCTTTTTTGGGCAATTTTGATGCTTCATTTGCTGCTTAAAGCTTCTTCCAATGCAGAAGGTGATGCCCTGTATGCATTGAAGAGCAGCTTGAATGATCCTAAAAGTGCTCTTCAAAGTTGGGATAATACCCTTATCAATCCCTGCACATGGTTTCATGTTGAATGCGATGCTGATAAAACTGTGACCCGTGTTGATCTTGGAAATATGGATCTTTCTGGTACACTGGTTCCAGAACTTGGTGATCTCTCAAATTTGAAGTCTTTGGCACTGTATAATAATAAAATAACAGGCACAATCCCAGAAGAGCTCGGAAATTTGACAAGCTTGGAGAGCTTGGATCTTTACCTGAACAATTTAAGTGGTACTATACCGAATACATTGGGCAAGCTTCAAAAACTACGTTTCCTGCGTCTCAATAATAACACCTTGACTGGCGGCATTCCCATGTCATTGACAAATGTTTCAACGCTGCAAGTTCTTGATCTCTCAAGCAACAATCTAGAAGGGGATGTTCCAGTGAATGGTTCATTTTTATTATTTACCCCTGTCAGTTATCATAATAATCCTCGCTTGAAACAACCAACAATCACTCCTGCACCAATTTCTCCACCATCACCAGCTTCTTCAGGTTCCACTGATACTGGAGCTATTGCTGGAGGAGTTGCTGTTGGTGCTGCTCTATTATTTGCTGCCCCTGCAATTGCAATTATTTATTGGCGCCGAAAAAAAAAACCACAAGATCATTTCTATGACGTTCCTGCTGAGGAGGATCCTGAAGTTCACCTTGGTCAGCTTAAAAGGTTTTCACTACATGAGCTTCGAGTAGCAACGGATAACTTTCGTAACGAAAACATTCTAGGTAGAGGTGGATTTGGAAAGGTTTATAAAGGACGCTTAGCTGATGGTACTCTTGTAGCAGTAAAAAGACTTAAAGAGGAACGTGCACAGGGTGATGAGCTGCAATTTCAGACAGAAGTGGAAATGATCAGCATGGCTGTGCATCGTAATTTGCTCCGGCTTTGTGGTTTTTGCATGACATCTACCGAACGTTTGCTTGTATATCCTTTGATGACTAATGGAAGTGTAGCATCATGTTTACGAGAACGTAATGACTCTCAACCACCGCTTGAGTGGACAACGCGGAAGAATATTGCGCTGGGAGCTGCTAGGGGGCTTGCTTACTTGCATGATTATTGTAACCCTAAGATTATTCATCGTGATGTGAAAGCTGCAAATATATTGTTGGATGATGAATTTGTAGCAGTTGTTGGAGATTTCGGTTTAGCAAGGGTTATGAATTGCAAAGACACTCATGTTACTACTGCTGTTCGTGGTACGGTTGGGCATATAGCACCTGAGTACCTGTCAACTGGAAAGTCTTCAGAAAAGACCGATGTTTTTGGATATGGTGTGACGCTTCTTGAACTAATAACTGGACAGAGGGCTTTTGATCTTGCACGTCTTGCCGGTGATGATGATGTGATGTTACTTGATTGGGTTAAAGGACTACTCACAGAGAAGAAGTTGGAAACACTTGTAGATCCAGAATTAAAAGGAAATTATGACGATGATGAGGTAGAGCAGTTATTCCAAGTGGCTTTACTATGCACACAAGGGTCCCCTATGGAAAGACCAAAGATGTCCGAGGTGGTTAGAATGCTAGAAGGCGATGGTTTGACCGAAAAATGGGAGCAATGGCAGAAAGAAGAAACATATCGGCAAGATTTTAGCAGCTATCGCATGCATTACCCTAAAGCAAATTGGATAGTGGTAGATTCAACTTCAAATATTCAGCCAGATGAACTCTCAGGACCTAGATGA 1845 0.4173 METVTSSFLFWAILMLHLLLKASSNAEGDALYALKSSLNDPKSALQSWDNTLINPCTWFHVECDADKTVTRVDLGNMDLSGTLVPELGDLSNLKSLALYNNKITGTIPEELGNLTSLESLDLYLNNLSGTIPNTLGKLQKLRFLRLNNNTLTGGIPMSLTNVSTLQVLDLSSNNLEGDVPVNGSFLLFTPVSYHNNPRLKQPTITPAPISPPSPASSGSTDTGAIAGGVAVGAALLFAAPAIAIIYWRRKKKPQDHFYDVPAEEDPEVHLGQLKRFSLHELRVATDNFRNENILGRGGFGKVYKGRLADGTLVAVKRLKEERAQGDELQFQTEVEMISMAVHRNLLRLCGFCMTSTERLLVYPLMTNGSVASCLRERNDSQPPLEWTTRKNIALGAARGLAYLHDYCNPKIIHRDVKAANILLDDEFVAVVGDFGLARVMNCKDTHVTTAVRGTVGHIAPEYLSTGKSSEKTDVFGYGVTLLELITGQRAFDLARLAGDDDVMLLDWVKGLLTEKKLETLVDPELKGNYDDDEVEQLFQVALLCTQGSPMERPKMSEVVRMLEGDGLTEKWEQWQKEETYRQDFSSYRMHYPKANWIVVDSTSNIQPDELSGPR* 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g2880 614 SUPERFAMILY Protein kinase-like (PK-like) 267 563 IPR011009 -
Tpr2g2880 614 SMART serkin_6 288 562 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g2880 614 Gene3D Transferase(Phosphotransferase) domain 1 365 582 - -
Tpr2g2880 614 ProSitePatterns Serine/Threonine protein kinases active-site signature. 411 423 IPR008271 GO:0004672|GO:0006468
Tpr2g2880 614 ProSiteProfiles Protein kinase domain profile. 288 572 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g2880 614 SUPERFAMILY L domain-like 25 186 - -
Tpr2g2880 614 ProSitePatterns Protein kinases ATP-binding region signature. 294 316 IPR017441 GO:0005524
Tpr2g2880 614 PANTHER BNAA08G11770D PROTEIN 7 614 IPR031048 GO:0004675|GO:0005102|GO:0006468
Tpr2g2880 614 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 7 614 - -
Tpr2g2880 614 Gene3D Phosphorylase Kinase; domain 1 257 363 - -
Tpr2g2880 614 Pfam Leucine rich repeat 91 151 IPR001611 GO:0005515
Tpr2g2880 614 MobiDBLite consensus disorder prediction 200 220 - -
Tpr2g2880 614 Pfam Leucine rich repeat N-terminal domain 25 64 IPR013210 -
Tpr2g2880 614 Gene3D Ribonuclease Inhibitor 23 207 IPR032675 -
Tpr2g2880 614 Pfam Protein tyrosine and serine/threonine kinase 291 562 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g2880 Tpr-Chr2 33329327 33335143 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g2880 9 614 Receptor kinase-like Gene Family AT4G33430 71.298 0.0 878
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Tpr2g2880 PK_Tyr_Ser-Thr 9.3e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g2880 K13416 - gmx:100800522 920.998