Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g2875 ATGAGTCAGGTTTTTAGTGATGGAGCTGTGGCAAGAGCCATAGATACAGAGGAAATAAATAGCAATCCAACTTCACGTAGACATGGTGCTGATGTTCTTCCACATATTCACAAAGTTGCAAGTCCTCCTAGGCAGACACTTTTCCAAGATTTCAAACATAATTTCAATGAAACTTTCTTCTCTGATGACCCTTTTGCCAAGTTTAAGGACCAAAAGGGATCAAGAAAGTTTGTTCTTGGATTACAATCTGTTTTTCCAATTTTTGATTGGGCAAGAGGTTATAACCTTAAAAGTTTTAAGGGTGATTTGATTTCTGGACTCACCATTGCTAGTCTTTGCATTCCTCAGGATATTGCATATGCAAAGCTTGCACATTTGGAGCCTCAATATGGACTTTATACTAGTTTTGTTGCACCTCTTGTGTATGCTTTCATGGGAAGTTCAAGGGATATTGCCATAGGACCAGTAGCTGTTGTGTCCCTCTTGCTTGGCACCTTGCTTTCAGATGAGATCAAAGACACCAAAAGTCCTGAATACCTTCGTCTCGCATTTACTGCAACTTTCTTTGCAGGAGTTACTCAAATGGCACTTGGACTTTTAAGGCTTGGTTTCTTGATTGATTTCCTATCTCATGCTGCAATTGTTGGATTCATGGGTGGAGCTGCCATTACTATTGCACTCCAACAACTTAAAGGTCTTCTTGGCATAAAGAACTTCACTACCAAAACTGATATTATTTCTGTCATGAGATCCGTTTTTAGTGTCGCACACCATGGGTGGAATTGGGAGACAATATTAATTGGACTATCATTCTTGGCTTTCCTTCTTACAACCAAATATATCGCTAAGAAGAAAAAGAACCTGTTTTGGGTGGCTGCAATATCTCCTATGATATGTGTTATAGTGTCTACTTTTTGTGTCTACATTACAAGGGCAGACAAGAAAGGAGTAGCAATTGTGAGACATATTAAAAAGGGTGTGAATCCAGCATCTGCTAGTGAAATATATTTCAGTGGAAATTATTTTACTGCTGGTATTAGGATTGGTTTGATTTCTGGTATGGTAGCACTCACGGAAGCTGTGGCCATTGCAAGAACATTTGCTGCTATGAAAGACTACTCAATTGATGGTAACAGAGAAATGGTGGCACTAGGAACAATGAATGTTATTGGTTCCATGACATCTTGTTATGTTGCTACAGGATCATTTTCTCGCTCGGCTGTGAACTATATGGCTGGTTGTAAAACTGCTGTATCAAACATAGTTATGTCCTTTGTGTTATTGTTAACACTGTTAGTGATTACACCACTATTCAAGTACACTCCAAATGCAGTGCTTGCCTCGATTATCATAGCTGCTGTGTTGAACCTGATTGACATTAAAGCTGCTATTCTTCTTTGGAAGATTGACAAATTTGATTTCCTAGCTTGCATGGGAGCCTTCTTTGGTGTCATCTTCAAAAGTGTTGAGATTGGCCTTCTAATCGCGGTAGCAATATCTTTTACCAAAATCCTTCTACAAGTGACCAGGCCTAAGACCGCAGTACTTGGGAAGCTTCCCGGTACAACGGTTTATAGGAACGTCCTGCAATATCCCAAAGCAGCACAAATTCCTGGCATGCTGATTGTCAGGGTTGATTCTGCAATCTACTTTTCAAATTCCAACTACATCAAGGACAGAATATTGAAGTGGCTGAATGATGAAGAGATTCTAAGAACATCAAGTGAATATCCAAGTATACAATATCTCATCGTTGAAATGTCACCTGTTACTGATATTGACACTAGTGGCATCCATGCTTTTGAAGATTTACTTAAGAGCCTCAAGAAAAAGGATGTTCAGCTTCTCGTGGCGAATCCGGGACCAATCGTAATTGAGAAGTTCCATGCATCAAAGTTAACAGGCTTAATCGGAGAAGATAAAATATTTCTAACAGTAGGTGATGCTGTTTCAACTTTTGTTCCAAAGGCTACAAATTAA 1980 0.3924 MSQVFSDGAVARAIDTEEINSNPTSRRHGADVLPHIHKVASPPRQTLFQDFKHNFNETFFSDDPFAKFKDQKGSRKFVLGLQSVFPIFDWARGYNLKSFKGDLISGLTIASLCIPQDIAYAKLAHLEPQYGLYTSFVAPLVYAFMGSSRDIAIGPVAVVSLLLGTLLSDEIKDTKSPEYLRLAFTATFFAGVTQMALGLLRLGFLIDFLSHAAIVGFMGGAAITIALQQLKGLLGIKNFTTKTDIISVMRSVFSVAHHGWNWETILIGLSFLAFLLTTKYIAKKKKNLFWVAAISPMICVIVSTFCVYITRADKKGVAIVRHIKKGVNPASASEIYFSGNYFTAGIRIGLISGMVALTEAVAIARTFAAMKDYSIDGNREMVALGTMNVIGSMTSCYVATGSFSRSAVNYMAGCKTAVSNIVMSFVLLLTLLVITPLFKYTPNAVLASIIIAAVLNLIDIKAAILLWKIDKFDFLACMGAFFGVIFKSVEIGLLIAVAISFTKILLQVTRPKTAVLGKLPGTTVYRNVLQYPKAAQIPGMLIVRVDSAIYFSNSNYIKDRILKWLNDEEILRTSSEYPSIQYLIVEMSPVTDIDTSGIHAFEDLLKSLKKKDVQLLVANPGPIVIEKFHASKLTGLIGEDKIFLTVGDAVSTFVPKATN* 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g2875 659 PANTHER SULFATE TRANSPORTER 20 657 IPR001902 GO:0015301|GO:0016020|GO:0055085
Tpr2g2875 659 SUPERFAMILY SpoIIaa-like 532 652 IPR036513 -
Tpr2g2875 659 Pfam STAS domain 531 649 IPR002645 -
Tpr2g2875 659 Gene3D STAS domain 510 654 IPR036513 -
Tpr2g2875 659 Pfam Sulfate permease family 99 478 IPR011547 GO:0016021
Tpr2g2875 659 CDD STAS_SulP_like_sulfate_transporter 531 646 - -
Tpr2g2875 659 ProSiteProfiles STAS domain profile. 530 653 IPR002645 -
Tpr2g2875 659 ProSitePatterns SLC26A transporters signature. 128 149 IPR018045 GO:0008271|GO:0008272
Tpr2g2875 659 TIGRFAM sulP: sulfate permease 86 649 IPR001902 GO:0015301|GO:0016020|GO:0055085
Tpr2g2875 659 PANTHER HIGH AFFINITY SULFATE TRANSPORTER 20 657 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g2875 Tpr-Chr2 33293077 33297370 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g2875 15 659 Inorganic Solute Cotransporters AT1G22150 70.433 0.0 907
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g2875 K17470 - gmx:100784124 1029.24