Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g2874 ATGTCCATGGAGGAAATAAAAAGCAATCCTTCTTCACGTAAACATGGTGATGATATTCTTCCAAATATTCACAAAGTTGCAAGTCCTCCTAAGCAAACACTTTTCCAAGATTTCAAACATAATTTCAATGAAACTTTTTTCTCTGATGACCCTTTTGCCAAGTTTAAGAATCAAACAGTATCAAGAAAGTTTGTTCTTGGATTACAATCTGTTTTTCCTATTTTTGATTGGGGAAGAGGTTATAACCTTAAAAGTTTTAAGGGTGATTTGATTGCTGGACTCACCATTGCTAGTCTTTGCATTCCTCAGGATATTGCATATGCAAAGCTTGCACATTTGGAGCCTCAATATGGATTGTATACTAGTTTTGTTGCTCCACTTGTGTATGCTTTCATGGGAAGTTCAAGAGATATTGCCATAGGGCCAGTAGCTGTGGTTTCCCTCTTGCTTGGCACTTTGCTTTCAGATGAGATCAAGGACACGAAAAGTCCTGAATACCTGCGTCTCACATTTACGGCAACTTTCTTTGCAGGAATCACTCAAATGGCACTTGGACTTTTAAGACTTGGTTTCTTGATTGATTTCCTATCTCATGCTGCAATTGTGGGATTCATGGGTGGAGCTGCTATTACTATTTCCCTCCAACAACTTAAAGGTCTTCTTGGCGTAAAGGACTTCACTACGAAAACTGATATTATTTCTGTCATGAGATCTGTTTTCAGTGCCGCCCACCATGGGTGGAATTGGGAGACAATAGTAATTGCAGTATCATTCTTGGCTTTCCTTCTTACAACCAAATATATTGCTAAGAAGAACAAGAAACTCTTTTGGGTGGCCGCAATATCTCCTATGATATGTGTTATAGTGTCTACTTTTTGTGTCTACATTACAAGGGCAGACAACAAAGGAGTAGCAATTGTGAGACATATTAAAAAGGGTGTGAATCCAGCATCTGCTAGTGAAATATATTTCAGTGGAAATTATTTTACTGCTGGTATTAGGATTGGTTTGATTTCTGGTATGGTAGCACTCACGGAAGCTGTGGCCATTGGAAGAACATTTGCTGCTATGAAAGACTATTCAATTGATGGTAATAGAGAAATGGTGGCGCTAGGAACAATGAACGTTATTGGTTCGATGACATCTTGTTATGTTGCCACAGGATCATTTTCGCGCTCAGCTGTGAATTACATGGCTGGTTGTAAAACTGCAGTATCAAACATAGTTATGTCCTTTGTGTTGTTGTTAACCTTGTTACTGATTACACCACTATTCAAGTACACTCCGAATGCAGTGCTTGCCTCAATTATCATAGCTGCTGTGTTGAACCTGATTGACATTAAAGCAGCTATTCTTCTTTGGAAGATTGACAAATTTGATTTTCTAGCATGCATGGGAGCCTTCTTTGGTGTTGTCTTCCATAGTGTTGAGATTGGCCTTCTAATCGCGGTGGCAATATCTTTCGCGAAAATCCTTTTACAAGTCACAAGGCCAAGGACTGTAGTACTTGGGAAGCTATCAGGGACAACTGTTTATAGGAACATCCTGCAATATCCTAAAGCAGAACAGATTCCTGGCATGCTGATTGTCAGGGTTGATTCTGCAATCTACTTTTCAAATTCCAACTACATTAAGGAAAGAATATTGAAGTGGCTAACTGATGAAGAGATTCTAAGGACATCAAGTGAATATCCAAGTATACAGTATCTCATCGTTGAAATGTCACCTGTTACTGATATTGACACTAGCGGCATCCATGCCTTTGAAGATTTACTTAAAAGCCTCAAGAAAAGAGATGTTCAGCTTCTTGTGGCGAACCCGGGACCAATTGTAATTGAAAAGCTCCATGCATCGAAGATATCAGACTTAATAGGAGAAGATAAAATATTTCTAACAGTAGGTGATGCTGTTGCAACTTTTGGTCCAAAGGGTGCAGATTTATGA 1944 0.3899 MSMEEIKSNPSSRKHGDDILPNIHKVASPPKQTLFQDFKHNFNETFFSDDPFAKFKNQTVSRKFVLGLQSVFPIFDWGRGYNLKSFKGDLIAGLTIASLCIPQDIAYAKLAHLEPQYGLYTSFVAPLVYAFMGSSRDIAIGPVAVVSLLLGTLLSDEIKDTKSPEYLRLTFTATFFAGITQMALGLLRLGFLIDFLSHAAIVGFMGGAAITISLQQLKGLLGVKDFTTKTDIISVMRSVFSAAHHGWNWETIVIAVSFLAFLLTTKYIAKKNKKLFWVAAISPMICVIVSTFCVYITRADNKGVAIVRHIKKGVNPASASEIYFSGNYFTAGIRIGLISGMVALTEAVAIGRTFAAMKDYSIDGNREMVALGTMNVIGSMTSCYVATGSFSRSAVNYMAGCKTAVSNIVMSFVLLLTLLLITPLFKYTPNAVLASIIIAAVLNLIDIKAAILLWKIDKFDFLACMGAFFGVVFHSVEIGLLIAVAISFAKILLQVTRPRTVVLGKLSGTTVYRNILQYPKAEQIPGMLIVRVDSAIYFSNSNYIKERILKWLTDEEILRTSSEYPSIQYLIVEMSPVTDIDTSGIHAFEDLLKSLKKRDVQLLVANPGPIVIEKLHASKISDLIGEDKIFLTVGDAVATFGPKGADL* 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g2874 647 PANTHER SULFATE TRANSPORTER 7 647 IPR001902 GO:0015301|GO:0016020|GO:0055085
Tpr2g2874 647 ProSitePatterns SLC26A transporters signature. 115 136 IPR018045 GO:0008271|GO:0008272
Tpr2g2874 647 Gene3D STAS domain 497 641 IPR036513 -
Tpr2g2874 647 ProSiteProfiles STAS domain profile. 517 640 IPR002645 -
Tpr2g2874 647 Pfam STAS domain 518 636 IPR002645 -
Tpr2g2874 647 TIGRFAM sulP: sulfate permease 73 636 IPR001902 GO:0015301|GO:0016020|GO:0055085
Tpr2g2874 647 Pfam Sulfate permease family 86 465 IPR011547 GO:0016021
Tpr2g2874 647 PANTHER HIGH AFFINITY SULFATE TRANSPORTER 7 647 - -
Tpr2g2874 647 CDD STAS_SulP_like_sulfate_transporter 518 633 - -
Tpr2g2874 647 SUPERFAMILY SpoIIaa-like 519 641 IPR036513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g2874 Tpr-Chr2 33278784 33282603 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g2874 21 646 Inorganic Solute Cotransporters AT1G22150 72.568 0.0 918
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g2874 K17470 - gmx:100784124 1030.39