Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g2873 ATGCATTCTCAACATAAAAACATAGACAAAAACATAACCAAAATGGATGTTTTATTATCCTTAAACTCACCAAACCTTATCAACATTTCAAAACCATATCAATATCATAATCTTCCAACACTCTCAAATAAACAACAAATTAGACAACCTCGTACTCAGTTTTCTATTTCATGCAGAGCCACAAACACAAAAAATGTTCCAATTCATGAAGTTAATGATGATGATGATGGAAATTTCTACAAGGTACTATGTTTGAGTCCAAAAAGTGCAACAATGGATGACATAAAAAGAGCATATAGAACAATGGCTCTTCAATATCATCCTGATTTGTGTCACGATCGTTTGAAGAACGAGGAATCAACGCGGATGTTTGTACAAGTGAATGCAGCTTATAAGACTCTGTCAAATCCAGAGCTAAAAGCAGAGTATGATTATGAAATTGGTTTGGGTTTGAGAAGAAGTAGGTGGATGGAACAAGTGATTGAGTTGAAAAGAAGGTCTCATAATGAAGGATCATGGGGTAGTAGAATGAGAGCCATGAACAATATCAACAAAGACGATGATCATTGA 570 0.3456 MHSQHKNIDKNITKMDVLLSLNSPNLINISKPYQYHNLPTLSNKQQIRQPRTQFSISCRATNTKNVPIHEVNDDDDGNFYKVLCLSPKSATMDDIKRAYRTMALQYHPDLCHDRLKNEESTRMFVQVNAAYKTLSNPELKAEYDYEIGLGLRRSRWMEQVIELKRRSHNEGSWGSRMRAMNNINKDDDH* 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g2873 189 Pfam DnaJ domain 78 144 IPR001623 -
Tpr2g2873 189 PANTHER CHAPERONE PROTEIN DNAJ 20 CHLOROPLASTIC 25 185 - -
Tpr2g2873 189 SMART dnaj_3 77 139 IPR001623 -
Tpr2g2873 189 PANTHER CHAPERONE DNAJ DOMAIN PROTEIN 25 185 - -
Tpr2g2873 189 ProSiteProfiles dnaJ domain profile. 78 147 IPR001623 -
Tpr2g2873 189 SUPERFAMILY Chaperone J-domain 75 147 IPR036869 -
Tpr2g2873 189 PRINTS DnaJ domain signature 81 99 IPR001623 -
Tpr2g2873 189 PRINTS DnaJ domain signature 99 114 IPR001623 -
Tpr2g2873 189 PRINTS DnaJ domain signature 119 139 IPR001623 -
Tpr2g2873 189 CDD DnaJ 78 136 IPR001623 -
Tpr2g2873 189 Gene3D DnaJ domain 68 168 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g2873 Tpr-Chr2 33276317 33277183 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g2873 80 144 C2H2 Transcription Factor Family AT1G74250 40.299 4.13e-07 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g2873 - - vun:114187063 174.481