Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g2860 ATGGCTTCAACCTCCAATATTGTGCTATTAGTTTCTATGTTACTAACAATTCTCGTTGCTTTGCAGTTCAAGGACGGTAAATGTTTCTCGACTATTCCTCACCCAGTACATGTATATGTTACCAACAACTTAACCGGCAATTTACAGCTTGGTGTCCATTGTAAAGACAAGCATGATGATTTTGGATATCGAATCACACATTTTCAAGAAAGTTATAACTTCACTGTTCATCCTACATTCATGATACCGAATAAATTATACTGGTGTAGTTTTTCATGGATTAATGGAGCTAAATATTTTGACATTTATGTTCAAAAACGAGATCAGGAGGATTGCGACAGAGAGTGTCATTGGCAAATAAATGCATACGGACCATGTAAGGTGAAGGTTGGATCTGTTCAATGTTTTCCGTGGAATGCTGCTATTGAAGGACGGACATAG 441 0.3719 MASTSNIVLLVSMLLTILVALQFKDGKCFSTIPHPVHVYVTNNLTGNLQLGVHCKDKHDDFGYRITHFQESYNFTVHPTFMIPNKLYWCSFSWINGAKYFDIYVQKRDQEDCDRECHWQINAYGPCKVKVGSVQCFPWNAAIEGRT* 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g2860 146 Pfam Plant self-incompatibility protein S1 37 138 IPR010264 -
Tpr2g2860 146 PANTHER S-PROTEIN HOMOLOG 18-RELATED 12 138 - -
Tpr2g2860 146 PANTHER - 12 138 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g2860 Tpr-Chr2 33157523 33157963 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g2860 17 140 Carbohydrate Esterase AT3G16970 33.333 4.72e-19 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g2860 - - mtr:MTR_2g008690 165.622