Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g2859 ATGATGATTTCAGTGTCCAAAATTTTGTCCTTAGTTCCGATTTTACTAATTATTTTTGTTGCTTTGCAATTCGCAGATGGTAAAGCTGAATATGTTGCCATTGATGGCTTTCCTCCAATCTTTCCACCAAGAGTTCATGTATTCATTAATAACAACATAAGCAATACTGCACTTGGAGTTCACTGTAAAGACAAAAACAATGATGCCGGCTTTCGTTCGATAAATTTTGGAGGAACTTACACGTTTGATTTTAAACCAAATAAATTTGTTCAATCAAGCTTATGGTTTTGTCGATTTTCATGGGGTAATGAATTTCAATACTTTGATATTTATGTCCAAAAACGTGATGTCAATCTTTGTGTGAAAGAATGTCATTGGGCAATAATTAAATCTGGAGCATGTAGGATTATAGACGGTTCTTCAGAATGTTTTCCTTGGAATCCAAAAGTTGTTACGGAACACTGA 465 0.3398 MMISVSKILSLVPILLIIFVALQFADGKAEYVAIDGFPPIFPPRVHVFINNNISNTALGVHCKDKNNDAGFRSINFGGTYTFDFKPNKFVQSSLWFCRFSWGNEFQYFDIYVQKRDVNLCVKECHWAIIKSGACRIIDGSSECFPWNPKVVTEH* 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g2859 154 PANTHER S-PROTEIN HOMOLOG 18-RELATED 21 146 - -
Tpr2g2859 154 PANTHER - 21 146 IPR010264 -
Tpr2g2859 154 Pfam Plant self-incompatibility protein S1 46 146 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g2859 Tpr-Chr2 33154706 33155170 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g2859 20 151 Carbohydrate Esterase AT3G16970 33.094 7.77e-21 81.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g2859 - - mtr:MTR_1g049030 169.088