Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g2854 ATGGTTGCATTATTAGTGGAGAAAAGGATTGCATCTTGTGACGAAGAAGAGACTAGTCATATAAATGAAATTTGTGATGATAAATTGGAAGAGAGTGGTCACATAAATGAAACTTGTGATGATAAATTAGAAGAGAGTTGTAACACAAATGAAGATGAAGAGCCTAAGGTTGGAATGATATTTAGTTCTCAAGAAGAAGTTACCAAATATTACAAGAATTATGCTAGGTGTATGGGTTTTGGAGTTAGTAAAATCAGTTCAAAAAATGGAGATGATGGAAAAAGATACTTTACTCTAGGATGTAGTCGTGCAAGAAGCTACGTGAGTAATTCAAAAAACCTTTTAAAGCCAAATCCTATCACAAAATCACAATGTAAGGCTAGAGTAAATGTGTGTGTGTCTTTAGATGGAACAGTTACAATTTCAAGAGTTTCTCTTGAGCATAATCATGAATTAAGCCCAAGCAAATCAAGATATTTTAGATGCAACAAGAATCTAGATCCTCATATAAAAAGAAGGTTGGAGCTTAATGATCGAGCTGGGATAAATGTAAGCAGAAATTTTCGGTCTATGGTTGTTCAAGCGAATGGGTATGATAATCTTACCTTTGGGGAAAAAGATTGTAGAAACTACATAGACAAATTAAGGAGACTTCGACTTGGGATAGGAGATGCTGAAGCTATTCGAAACTATTTTGTTGGAATGCAAAGAAAAAATAGTCATTTTTTTTATGTAATGGATGTTGATGACTCAAGTCATTTAAGAAATGTATTTTGGGCAGATGCCAGATGTAGAGCTGCTTATGAGTATTTTGGTGAAGTAATAACATTTGACACCACTTATTTAACTAATAAATATGACATGCCTTTTGCTCCTTTTGTTGGAGTAAATCATCACGGTCAATCAATTTTGTTAGGTTGTGCCCTATTGTCGAATGAAGATACTGAAACTTTTACTTGGTTGTTCACTACATGGTTAGCATGTATGAATGGGCGTGCACCAAATGCTATAATTACTGATCAGGATAGAGCAATGAAGAATGCAATTGAGGCTGTCTTTCCAAAAGCTCGGCATCGGTGGTGCTTGTGGCATATAATGAAAAAGGTTCCAGAAAAATTGGGTAGACACTCTGATTATGAGTCTATCAAAATACTTTTGCATGATGCTGTATATGATTCATCGAGCATAAGTGATTTCATGGAGAAGTGGGAAAAAATGATTGAAAGTTATGAATTGCATGATAATGATTGGTTGAAAGGGTTGTTTGATGAGCGACATCGTTGGGCTCCCGTGTATGTGAGAGACACATTTTGGGCTGGAATGTCAACTACACAACGAAGTGAAAGTATGAACTCATTTTTTGACGGGTATGTGAACTCAAAGACAACATTGAAGCAATTTGTTGAACAATATGATAATGCATTAAAAGATAAAATTGAAAAGGAAAACTTGGCTGATTTCCATTCGTTCAATAGAATTATTGCTTGTATAAGTTTTTATGGATTTGAGTCACAATTCCAAAAGGCTTTTACCAATGCAAAATTCAAAGAGTTTCAAGCAGAAGTTGGTGCTATGATGTATTGTCGTGCTTCCTTTGAAAGAATAGAGGGTTTAAGTTCAACATTTTGTGTTACAGAAAGTAAAAAAGTATTTGATAAAGTTAAAAACATAATGTTCATGGTATCATTCAATGAGAAGGACTTTGAAATACATTGTACATGTTGTTTATTTGAGTTTAAAGGTATTTTATGCAGACATATCCTTTGTGTTCTTAATCTCACGGGTAAAACTGAGTCAGTGCCATCTTCTTATATATTGCCAAGGTGGAGGAAGGATATTAAGAGGAGGCATACACTTATAAAATGTAGTTTTGATCAGTTAGCCGGAAATGAAGAGTTGCAGCGTGTTAGTAAAGCTTGTGATGCCTTTTACGAAGTTGCTTCTTTGGGGATACAAACTGAAGATGATCTATTGAAAGTGATGAATTGGATCAAAGACTTGAAAATTGAGTTGACATGTAAACAAAGTCCTCCAGAGGTTATTGAAAGAGATAGTTTGGTTCAAAAGCAGAGGAATAAAATTCTTGACCCTAAAGAGGCTCGAAGTAAAGGGCGTCCTCCTTTCAAAAGGAAGGCTTCTAAGGTTGATCAGATTGTAAAAAAGAAGCTTGTTGGAAAGAAAACTCAAAAAAGAAACAAAAAAAGCAACAATTATCAAAGTCAAGAAGAGGGACCTAGTATATCTAAAGCTCAAGATTATGAAGATTTTTCTACATCTCAGAGCATTGATCTTAATGTGATTGGCACACAAGAGAGCATTCAAGTAAATAAAATTTTAGCTCCCTTCAATCCAAATCAAAAATATATTGATGATGCTAATCAGGCTCCAAACTATTCTCAAAGCATAAACAGTAATATTTCGTATTCAGAACTTTTACAGGCACAACATCATATAAATGATCGCCCATTATCATGA 2475 0.3442 MVALLVEKRIASCDEEETSHINEICDDKLEESGHINETCDDKLEESCNTNEDEEPKVGMIFSSQEEVTKYYKNYARCMGFGVSKISSKNGDDGKRYFTLGCSRARSYVSNSKNLLKPNPITKSQCKARVNVCVSLDGTVTISRVSLEHNHELSPSKSRYFRCNKNLDPHIKRRLELNDRAGINVSRNFRSMVVQANGYDNLTFGEKDCRNYIDKLRRLRLGIGDAEAIRNYFVGMQRKNSHFFYVMDVDDSSHLRNVFWADARCRAAYEYFGEVITFDTTYLTNKYDMPFAPFVGVNHHGQSILLGCALLSNEDTETFTWLFTTWLACMNGRAPNAIITDQDRAMKNAIEAVFPKARHRWCLWHIMKKVPEKLGRHSDYESIKILLHDAVYDSSSISDFMEKWEKMIESYELHDNDWLKGLFDERHRWAPVYVRDTFWAGMSTTQRSESMNSFFDGYVNSKTTLKQFVEQYDNALKDKIEKENLADFHSFNRIIACISFYGFESQFQKAFTNAKFKEFQAEVGAMMYCRASFERIEGLSSTFCVTESKKVFDKVKNIMFMVSFNEKDFEIHCTCCLFEFKGILCRHILCVLNLTGKTESVPSSYILPRWRKDIKRRHTLIKCSFDQLAGNEELQRVSKACDAFYEVASLGIQTEDDLLKVMNWIKDLKIELTCKQSPPEVIERDSLVQKQRNKILDPKEARSKGRPPFKRKASKVDQIVKKKLVGKKTQKRNKKSNNYQSQEEGPSISKAQDYEDFSTSQSIDLNVIGTQESIQVNKILAPFNPNQKYIDDANQAPNYSQSINSNISYSELLQAQHHINDRPLS* 825
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g2854 824 SMART 26again6 570 597 IPR006564 GO:0008270
Tpr2g2854 824 ProSiteProfiles Zinc finger SWIM-type profile. 559 595 IPR007527 GO:0008270
Tpr2g2854 824 Pfam FAR1 DNA-binding domain 69 153 IPR004330 -
Tpr2g2854 824 PANTHER OS03G0843700 PROTEIN 40 642 - -
Tpr2g2854 824 MobiDBLite consensus disorder prediction 691 748 - -
Tpr2g2854 824 MobiDBLite consensus disorder prediction 709 723 - -
Tpr2g2854 824 Pfam MULE transposase domain 274 368 IPR018289 -
Tpr2g2854 824 MobiDBLite consensus disorder prediction 734 748 - -
Tpr2g2854 824 Pfam SWIM zinc finger 567 592 IPR007527 GO:0008270
Tpr2g2854 824 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 40 642 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g2854 Tpr-Chr2 33109644 33112390 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Tpr2g2854 MULE 7.8e-37 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g2854 - - cam:101506732 1025