Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g2847 ATGAAGGAAGAAGAAGAATCAACGGTGAAGATGGAATGGTTAACTTCCATTGATTCAACAACTCTCTCTCACTCTGAACTTCAAACACTTTCTCTCTCTTCTCTCTCTTCCTTCGACCTAAAATCTACGCGCCAAATCGTCACTCCCAAAATCGATCCCTCAACTTTCAACCACAGCGCCGGTTCTCACCGTCAAACCTACTCCCGATCTCACCGACGTTGTCGTGCACCGCCACTTCTTCCAACTCCCGTTCTTCCCTCCGACCACCGTATCATTATTGATTACCTCAAACAGTTTATTAGAGAAGATCCGAAGTTCGATCAGGTTGAGCTTCTTCAGCCTGTAGTTGTTCCTTCAATTTCACCGCCGGTGGTATTTTCCGGTGAGGTGAGGAAGAGAAAAAGAGGGAGGAAACCTAAAATGAAGGTGCATTTGGATGAGTGTTATAGAGGGATGGAGATTGTGAATAAGAATGGTGTTGCTGTTGATTTGAATGTGTTGTCGATGGTGGAGCATCCGTTTGCGGCCGAGATTGCGAGAAGGACGGAAGGGTTGAGTAAGGAAGAGGAATTGTTAGAGTTTTTGAGTGATTTGGTTGGTCAGTGGGGAAGTAGGAGAAGGAAGAGGAGGATTGTTGATGCTGCTGATTTTGGAGATGTGTTGCCTCTTGGTTGGAAGCTTTTGCTTAGTTTGAAGAGGAAAGATGGTCGTGCTTGGATCTATTGCAGGAGATATATAAGCCCTAGTGGACAGCAGTTTGTGTCTTGCAAAGAAGTTTCTTCCTATTTGCAGTCTCGTTTTGGTCACTCTGATTTACAGTTACAAATCAGTCATAGGAGTGAAAGCATACTTCAAGAACAGAGAGTGACTACTGAAAATTCTACAGGTGTTGCTCACGAGGAGCAGGATCAACGGCAGATTGTTGCCACTAACTCGGATGTGTCTGGTTTGTCCGTCTCTAATGAACGGTTGAAGGAAATGTCCTTGTTGGAGATGGAGAACCTTGCAGATGTGCAAATACATGATCTGTTTGAATGTCACAAGTGCAACATGACCTTCGGTGAGAAGGATGCGTACTTGGAGCACCTGTTGTCTATTCATCAGAAGACGACGAGGCGTTATCGACTTGGTTCATCTGTTTCAGATGGAGTTATAATTAAAGATGGGAAGTTTGAGTGCCAGTTCTGTCATAAAGTGTTTCTGGAAAAGCGTCGCTACAATAGTCACGTTGGGATACATGTTAGGAATTATTTGAGGAAAGCTGAAGACTTGCCGGATCAGCCTAATGTCTCGAGAGCAGAAGAGTCTCCAGTCACAGATGAGATGCCTTCAAAGATCTCTAAGATGGATGCCCTCATCGAAATTGCTCAAAACTCTATTGTGGAGGATTCTGTCATGGAACCAAGTTCCTCTAAACTGAATACGATTCATGCTTCAGAAATTGCGGCTGGCGACTTAGATGAAGACATAAATGTTGAGTCTCTGGTCAGTGAACAGCAAATGGAAGAGAGCTTGATTGGCCCAAATGTAGTTCACGATTTAAATCGGCAAGTTAGTCCTCATTTACCCATGGGTGGAACAATAGAGAAAATTGACAACGATAACCGAGTTATTAATGCAAAGATTTATAGTTTTCTAGATAACACAAGCTTGTTATCTGTAAATAATAAAAATGTTGATGCACCTGATACTTCTAAAGGAAAAGGTGGTGCGGCGCCGACTGTTGACGGATTTGATCATTCTGGGATTGATCTGCAAGGAATTTCTCAAATCCCGTTGCTTCCTTCATTTGGGAATCACATGACACCTGGATATGAGAAGAGTGAAAATTCTGGTTGCACTAATACTAAGGGGGATCTTAAACTTGACGAAAACAATAGTAATAAGAGTGACTTGAAAATTGGTTTAGATGGCTGCAAGGATGTACCCGGTGTTGCTAATGTTCAAGTGACAGCAATGCCAACTTCTAAAGAAAATGTGATCCAATCTATGGTTTCTAACCCCTCTGTATCCCCAGAACAATCCATGGATTCTTTTTCTGCATTCAGCTCAGACAAGGGGTTCCAGGAATTGAGGTTAGAAGATATTGGTTCTCTTGAGTATGATTTTGCAAGTGTTCAAGATGTGTCAGCTGAATTGGCAAATAACATAGTGGTGCAAGGGACATGTGCATCACAAGAAGTTATGTTAAATTTGGGTGCCAATAATCAGCTCACAACCACGTGTGTATGGTGTGGAATAGAGTTTAACCACGATGCTGTTAATTCTGAAATACAATCAGATTCTGTTGGATTCATGTGTCCAGTTTGCAAGGCAAAAATATCTGGTCAAATCAATGTGTTGGACACTGGATCACCAAATGCTGGCCATCTTTAG 2376 0.4247 MKEEEESTVKMEWLTSIDSTTLSHSELQTLSLSSLSSFDLKSTRQIVTPKIDPSTFNHSAGSHRQTYSRSHRRCRAPPLLPTPVLPSDHRIIIDYLKQFIREDPKFDQVELLQPVVVPSISPPVVFSGEVRKRKRGRKPKMKVHLDECYRGMEIVNKNGVAVDLNVLSMVEHPFAAEIARRTEGLSKEEELLEFLSDLVGQWGSRRRKRRIVDAADFGDVLPLGWKLLLSLKRKDGRAWIYCRRYISPSGQQFVSCKEVSSYLQSRFGHSDLQLQISHRSESILQEQRVTTENSTGVAHEEQDQRQIVATNSDVSGLSVSNERLKEMSLLEMENLADVQIHDLFECHKCNMTFGEKDAYLEHLLSIHQKTTRRYRLGSSVSDGVIIKDGKFECQFCHKVFLEKRRYNSHVGIHVRNYLRKAEDLPDQPNVSRAEESPVTDEMPSKISKMDALIEIAQNSIVEDSVMEPSSSKLNTIHASEIAAGDLDEDINVESLVSEQQMEESLIGPNVVHDLNRQVSPHLPMGGTIEKIDNDNRVINAKIYSFLDNTSLLSVNNKNVDAPDTSKGKGGAAPTVDGFDHSGIDLQGISQIPLLPSFGNHMTPGYEKSENSGCTNTKGDLKLDENNSNKSDLKIGLDGCKDVPGVANVQVTAMPTSKENVIQSMVSNPSVSPEQSMDSFSAFSSDKGFQELRLEDIGSLEYDFASVQDVSAELANNIVVQGTCASQEVMLNLGANNQLTTTCVWCGIEFNHDAVNSEIQSDSVGFMCPVCKAKISGQINVLDTGSPNAGHL* 792
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g2847 791 ProSiteProfiles Methyl-CpG-binding domain (MBD) profile. 211 283 IPR001739 GO:0003677
Tpr2g2847 791 SUPERFAMILY DNA-binding domain 217 271 IPR016177 GO:0003677
Tpr2g2847 791 PANTHER METHYL-CPG-BINDING DOMAIN PROTEIN 6 780 - -
Tpr2g2847 791 MobiDBLite consensus disorder prediction 51 72 - -
Tpr2g2847 791 Gene3D - 201 310 - -
Tpr2g2847 791 PANTHER METHYL-CPG-BINDING DOMAIN-CONTAINING PROTEIN 8 6 780 IPR037472 -
Tpr2g2847 791 ProSiteProfiles Zinc finger C2H2 type domain profile. 344 372 IPR013087 -
Tpr2g2847 791 SMART c2h2final6 344 367 IPR013087 -
Tpr2g2847 791 SMART c2h2final6 391 413 IPR013087 -
Tpr2g2847 791 ProSiteProfiles Zinc finger C2H2 type domain profile. 391 418 IPR013087 -
Tpr2g2847 791 Gene3D Classic Zinc Finger 318 418 - -
Tpr2g2847 791 Pfam Methyl-CpG binding domain 220 266 IPR001739 GO:0003677
Tpr2g2847 791 ProSitePatterns Zinc finger C2H2 type domain signature. 346 367 IPR013087 -
Tpr2g2847 791 ProSitePatterns Zinc finger C2H2 type domain signature. 393 413 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g2847 Tpr-Chr2 33041826 33046594 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Tpr2g2847 MBD 9.3e-05 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g2847 - - lang:109329666 902.123