Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g2838 ATGGATAGTCTCTGTTGCTTCAACTCTTCCAGAAAGGGTGTTGGAGGACGTTCTTCATGTAGCTCTGGCAAAGGCAAGAGCCTTCAGTGCCCTCTTAAGTATGGCTTTTGCTTAGTTGAAGGGACACAAGACCACACAATGGAGGACTTTCACGTTGCGAAAATTGTCCAGTTTAATGGCCGAGAGTTGGGACTTTTTGCTATATTTGATGGACACTTGGGTGACACTGTGCCTGCCTATTTACAAAAACATCTCTTTTCTAATATCTTGAAGGAAGAGAACTTTTGGACTGATCCAAACAGTTCGATCATCGAAGCTTATGAGGCAACGGATCAGGCCATTCTATCTCACAATCCTGATTTGGGGCGAGGGGGATCGACTGCAGTGACAGCCATTCTTATAAATAATCAGAAGTTATGGATAGCAAATGTTGGAGATTCACGGGCTGTTCTTTCGAGGAAAGGCGTCGCTATACAGATGAGTATTGATCATGAGCCTAATACTGAAAGACGCATCATCGAGAATAAAGGAGGCTTTGTCTCGAACCTTCCAGGAGATGTTGCTAGAGTGAATGGACAACTTGCAGTTGCTCGTGCATTTGGAGACAGAAACCTGAAGTCACACTTACGATCTGATCCAGACGTACAACCTGAAGATATCGATCAAGATACTGAGCTCTTGATACTTGCTAGTGATGGTCTATGGAAGGTAATGGCAAACCAAGAAGCAGTTGATATTGCCATAAAGATAAAAGATACACAAAAGGCAGCTAAACAACTAATTGCAGAAGCATTGAAAAGAGAGAGTAGGGATGACATTTCCTGCATTGTTGTTCGATTCAAATGA 846 0.4279 MDSLCCFNSSRKGVGGRSSCSSGKGKSLQCPLKYGFCLVEGTQDHTMEDFHVAKIVQFNGRELGLFAIFDGHLGDTVPAYLQKHLFSNILKEENFWTDPNSSIIEAYEATDQAILSHNPDLGRGGSTAVTAILINNQKLWIANVGDSRAVLSRKGVAIQMSIDHEPNTERRIIENKGGFVSNLPGDVARVNGQLAVARAFGDRNLKSHLRSDPDVQPEDIDQDTELLILASDGLWKVMANQEAVDIAIKIKDTQKAAKQLIAEALKRESRDDISCIVVRFK* 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g2838 281 SMART PP2C_4 21 278 IPR001932 -
Tpr2g2838 281 ProSiteProfiles PPM-type phosphatase domain profile. 33 280 IPR001932 -
Tpr2g2838 281 PANTHER PHOSPHATASE 2C FAMILY PROTEIN 1 280 - -
Tpr2g2838 281 SMART PP2C_SIG_2 44 280 IPR001932 -
Tpr2g2838 281 Pfam Protein phosphatase 2C 44 273 IPR001932 -
Tpr2g2838 281 PANTHER PROTEIN PHOSPHATASE 2C 1 280 IPR015655 GO:0004722|GO:0006470
Tpr2g2838 281 CDD PP2Cc 45 280 IPR001932 -
Tpr2g2838 281 Gene3D - 17 281 IPR036457 -
Tpr2g2838 281 SUPERFAMILY PP2C-like 28 281 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g2838 Tpr-Chr2 32978651 32982124 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g2838 1 281 PP2C-type Phosphatase Gene Family AT1G22280 65.505 2.42e-134 380
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g2838 K17506 - gmx:100787659 441.425