Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g2837 ATGGCGGAGCGTCCTTCTTACGGATTAGGTCCTCGATTAGATATTCAGCAATTACAATTTGAAGCACAACATCGGTGGTTACGACCTGCAGAAATTTGTGAAATTCTTCGTAATTATCGGCTGTTTCACATCACATCAGAACCTCATATAAGGCCACCGAGTGGTTCACTTTTTCTTTTTGACCGGAAGGTTTTGAGATACTTTAGAAAGGATGGACATAATTGGAGAAAGAAAAAAGATGGAAAAACAGTGAAAGAAGCTCATGAAAAATTAAAGGTCGGAAGTGTTGATGCGTTACACTGCTACTATGCACATGGAGAAGAAAACGAAAATTTTCAAAGGAGAAGCTATTGGTTGCTTGAACAGGATACACACATAGTATTTGTCCACTACTTGGAAGTTAAGGGGAACAAGTCAAATATTGGAGGAAGTGCCGATAGCGATGGGGTCATATCAGATTCCCAAAAGGTCAACTCTCCGTCGTCTGGTTTTCCCACAACTTATAGTAGTGTGCCTTCACTGAGTACAGATTCCATGAGCCCAACTAGCAGCTTGGCATCTTTACGTGAAGATGCTGATTCAGGTGATCATGGACAGTCTTCAGTTTCTGGAACGGATTATATCCCACTTTTTGACAGGGATAAATTTAGCGGAAATGATGGTAATTGTATTGATGGCCCGAAAGCACATGGCTTGGCATCATGGGACACAGTCTTGCAATGCACTGCTGAGTTGAATGCTGATCCTTCTCTTGTATCTATCCCTTCCTTTCCACCTGGTTCCCTGGCAAACATCCTTGACCAAGAACATAACATCTTGGGAGACTTTTCAATGAGCAGAAGTGGCTACACTATTGGAGCAGGGGGCTCTCAGCCTCTCCAACCAAATTGGCAGATTCCTTTTGAAGACAACACAGGACACATGCCAACTTTTACCCAATCATTGAGTTTGGAATTTGGATCTGATTATGGCACTGGTTTACTAGGGAATGTAGCTCATAATGAAAGTTCTGAAATTGATCCTGTCATGTTTAATTTTCATGGTGAGCCAAAAGAGAAGCTTGCACATCAAAACTATATGGAAGAGACGGTAGATGGACACCCACAAGTTGACCTTAAGTCCAATTCCGCAAATGAAGTTCCTAGTGAAGAAACTATTAACCATCCCTTATCTGTGAGGCGCTCATTATTGGATAGGGATGAGAGCTTGAGGAAGGTTGATAGCTTCAATCGATGGATTACTAAAGCACTTGGAGAGGTGGATAATTTGAATATGCAGTCCTCACCTGGTATTTCATGGAGTACAGATGAATGTGGGCATGTGATAGATGAAACCTCACTGAGCCCATCTCTGTCTCAGGACCAACTGTATAGCATAAATGATTTTTCACCCAAATGGGCCGATGCAGATTCAGACATTGAGGTGTTGATTATTGGATCATTTTTGAAGACTCAACCAGATGTTTCAACCTATAATTGGTCCTGTATGTTTGGGGAAGTTGAGGTTCCTGCTGAGGTTGTAGCTAATGGGATTCTGTGCTGTCAAGCTCCTCCTCATAAGGTTGGGCGGGTACCTTTCTATGTAACTTGTTCCAATAGGTTAGCTTGCAGTGAGGTGCGTGAATTTGATTTCAGAGAGGGCTATTCTAGAAATGTAGATTATTCAGAGTTTTTCAATAGTTCGAATGAAATGCTGCTTCATTTGCGACTGTACGAGTTTCTTTCTTTAAAACCAGTACACCCTTCAAATCAAACCTTTGAGGGTGATACGGAGAAAAGAAACTTAATTCGTAAGCTTATTTCACTGAGAGAGGAAGAAGATTATTCAATCAAGGAAGAGCGGGTTGTAGAGATGGATATATCACAACACAAGGTGAAGAAGCATCTGTTTCACAGGCAGGTTAAAGAGAAACTGTACTCATGGCTTCTTCACAAGGTAACTGAGAGTGGTAAAGGACCAAACGTGTTAGATAAGGATGGGCAGGGCGTGCTACATTTAGCAGCTGTTCTTGGTTATGACTGGGCAATAACCCCAATTTTAACTGCTGGAGTTAATATCAACTTCCGTGATGTGAATGGATGGACGGCCTTACATTGGGCAGCATCCTGTTGCAGAGAGCGGACAGTTGCTGCCCTTGTATCCATGGGTGCAGATTGTGGAGCATTGACAGATCCATCTCCAGAATTTCCTTCAGGGAGAACAGCTGCAGATCTCGCATCTAGCAATGGCCACAAAGGACTCTCCGGTTTTCTTGCAGAATCTTCATTAACCAGCCACCTTGAAGCCCTCACAGTGGATGATCAACAAAAAGGTGGTCTGCAAGAAATTTTAGGAACAAAAGCAGTGCAGACCGTTTCGGAGCGAACTGCAACACCCGTCTATAGTGATATGCCTGATGCCCTCTGCCTTAAGGATACTCTAACCGCTGTCCGTAATGCTACACAAGCTGCTGATCGCATACATCAAGTATTCAGAATGCAGTCCTTTCAGAGGAAGCAGTTAACTCAGTATGAGGATGATGAGTTTGGTTTGTTAGATCAGCGGGCTCTTTCCCTACTAGCTTCTAAGGCGTCCAAGTCAGGACATGGAGATGGCTTAGTCAATGATGCTGCTACTCAAATACAGAAAAAGTACCGTGGTTGGAAGAAGAGAAAAGAATTCTTGATCATCCGTCAAAGAATTGTTAAAATCCAGGCCCATGTAAGAGGTCACCAGGTAAGGAAGCAGTATAAAACTGTCATCTGGTCCGTTGGAATCCTGGAGAAGGTTATATTACGATGGAGACGCAAGGGTAGTGGTCTACGTGGGTTTCGACCAGAAACCCTTAATAAAGCCCCCAGTCAACAAAATGATTCTCCGAAAGAGGATGATTATGATTATCTAAAGGAAGGACGAAAACAAAAAGAGGAAAAGATCGAAAAGGCCCTTTCTAGGGTGAAGTCCATGGTTCAGTATCCAGAGGCACGCGCTCAATACCGGCGTGTACTAAATGTTGTTGAAGACTTCCGTCAAAAGAAGGATTGTAATATGGGTTTGATCAGTTCTGAAGAGACAGTTGATGGTGTGGAGGATTTGATCGACATTGATATGCTTTTAGATGATGAAAATTTCAATGCCATAGCATTTGATTCTCTGTAG 3138 0.427 MAERPSYGLGPRLDIQQLQFEAQHRWLRPAEICEILRNYRLFHITSEPHIRPPSGSLFLFDRKVLRYFRKDGHNWRKKKDGKTVKEAHEKLKVGSVDALHCYYAHGEENENFQRRSYWLLEQDTHIVFVHYLEVKGNKSNIGGSADSDGVISDSQKVNSPSSGFPTTYSSVPSLSTDSMSPTSSLASLREDADSGDHGQSSVSGTDYIPLFDRDKFSGNDGNCIDGPKAHGLASWDTVLQCTAELNADPSLVSIPSFPPGSLANILDQEHNILGDFSMSRSGYTIGAGGSQPLQPNWQIPFEDNTGHMPTFTQSLSLEFGSDYGTGLLGNVAHNESSEIDPVMFNFHGEPKEKLAHQNYMEETVDGHPQVDLKSNSANEVPSEETINHPLSVRRSLLDRDESLRKVDSFNRWITKALGEVDNLNMQSSPGISWSTDECGHVIDETSLSPSLSQDQLYSINDFSPKWADADSDIEVLIIGSFLKTQPDVSTYNWSCMFGEVEVPAEVVANGILCCQAPPHKVGRVPFYVTCSNRLACSEVREFDFREGYSRNVDYSEFFNSSNEMLLHLRLYEFLSLKPVHPSNQTFEGDTEKRNLIRKLISLREEEDYSIKEERVVEMDISQHKVKKHLFHRQVKEKLYSWLLHKVTESGKGPNVLDKDGQGVLHLAAVLGYDWAITPILTAGVNINFRDVNGWTALHWAASCCRERTVAALVSMGADCGALTDPSPEFPSGRTAADLASSNGHKGLSGFLAESSLTSHLEALTVDDQQKGGLQEILGTKAVQTVSERTATPVYSDMPDALCLKDTLTAVRNATQAADRIHQVFRMQSFQRKQLTQYEDDEFGLLDQRALSLLASKASKSGHGDGLVNDAATQIQKKYRGWKKRKEFLIIRQRIVKIQAHVRGHQVRKQYKTVIWSVGILEKVILRWRRKGSGLRGFRPETLNKAPSQQNDSPKEDDYDYLKEGRKQKEEKIEKALSRVKSMVQYPEARAQYRRVLNVVEDFRQKKDCNMGLISSEETVDGVEDLIDIDMLLDDENFNAIAFDSL* 1046
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g2837 1045 Pfam Ankyrin repeats (3 copies) 638 720 IPR002110 GO:0005515
Tpr2g2837 1045 MobiDBLite consensus disorder prediction 938 957 - -
Tpr2g2837 1045 Gene3D Immunoglobulins 452 548 IPR013783 -
Tpr2g2837 1045 ProSiteProfiles Ankyrin repeat profile. 659 691 IPR002110 GO:0005515
Tpr2g2837 1045 ProSiteProfiles IQ motif profile. 890 914 IPR000048 GO:0005515
Tpr2g2837 1045 Pfam CG-1 domain 21 133 IPR005559 GO:0003677
Tpr2g2837 1045 MobiDBLite consensus disorder prediction 151 189 - -
Tpr2g2837 1045 Pfam IPT/TIG domain 459 533 IPR002909 -
Tpr2g2837 1045 MobiDBLite consensus disorder prediction 151 204 - -
Tpr2g2837 1045 SMART ANK_2a 659 688 IPR002110 GO:0005515
Tpr2g2837 1045 SMART ANK_2a 692 721 IPR002110 GO:0005515
Tpr2g2837 1045 SMART ANK_2a 731 760 IPR002110 GO:0005515
Tpr2g2837 1045 SMART CG_1_2 18 135 IPR005559 GO:0003677
Tpr2g2837 1045 ProSiteProfiles IQ motif profile. 868 896 IPR000048 GO:0005515
Tpr2g2837 1045 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 866 917 IPR027417 -
Tpr2g2837 1045 ProSiteProfiles Ankyrin repeat profile. 692 724 IPR002110 GO:0005515
Tpr2g2837 1045 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR 1 1 201 - -
Tpr2g2837 1045 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR 1 194 1043 - -
Tpr2g2837 1045 Gene3D - 867 913 - -
Tpr2g2837 1045 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 194 1043 - -
Tpr2g2837 1045 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 1 201 - -
Tpr2g2837 1045 SUPERFAMILY Ankyrin repeat 638 753 IPR036770 -
Tpr2g2837 1045 SMART iq_5 866 888 IPR000048 GO:0005515
Tpr2g2837 1045 SMART iq_5 889 911 IPR000048 GO:0005515
Tpr2g2837 1045 Pfam IQ calmodulin-binding motif 869 887 IPR000048 GO:0005515
Tpr2g2837 1045 Pfam IQ calmodulin-binding motif 892 911 IPR000048 GO:0005515
Tpr2g2837 1045 SUPERFAMILY E set domains 459 544 IPR014756 -
Tpr2g2837 1045 Gene3D - 619 762 IPR036770 -
Tpr2g2837 1045 ProSiteProfiles CG-1 DNA-binding domain profile. 15 140 IPR005559 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g2837 Tpr-Chr2 32965982 32975766 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g2837 1 1004 CAMTA Transcription Factor Family AT5G64220 51.951 0.0 1036
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CAMTA Tpr2g2837 CG-1 1.7e-50 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g2837 K21596 - gmx:100818124 1606.65