Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g2836 ATGTCATCTTCATCTTCAATAGTTCTAATCCAAATTCCAAAAACAATGGATTCTGTTGTAACGCAAAAGATACTTTTCAAACCTCTGAATCTAAATTTTCCCATCAGAAGCGGCATCCAACAGCAGCTGAACCACCGCGTTCTCTACCACAACTCTGTTATGCCATTGCGGTGCTCAGCCTCAACTCCTCCTCCTCCTTCTGATGATGCTATTGTTCTCAATGTTCGGGGAATGATGTGTGAGGGATGTGCTTCTAGCGTCAAGAAAATTCTAGAAACTCAACCACAAGTGTTATCTGCTACTGTGAATCTAACATCAGAGACAGCACTAGTTTCCCTTTCCCCTTTGTTATCCGAAGATAAAACTTCACCAAATTGGCAAAAGGAGTTAGGAGAAACACTTGCACACCATTTAACTACATGTGGTTTTACTTCTGCCCTTAGAGATCAGGAAGATAGAGACTAA 465 0.4129 MSSSSSIVLIQIPKTMDSVVTQKILFKPLNLNFPIRSGIQQQLNHRVLYHNSVMPLRCSASTPPPPSDDAIVLNVRGMMCEGCASSVKKILETQPQVLSATVNLTSETALVSLSPLLSEDKTSPNWQKELGETLAHHLTTCGFTSALRDQEDRD* 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g2836 154 ProSiteProfiles Heavy-metal-associated domain profile. 70 147 IPR006121 GO:0046872
Tpr2g2836 154 SUPERFAMILY HMA, heavy metal-associated domain 70 115 IPR036163 GO:0046872
Tpr2g2836 154 Pfam Heavy-metal-associated domain 72 115 IPR006121 GO:0046872
Tpr2g2836 154 Gene3D - 69 152 - -
Tpr2g2836 154 PANTHER COPPER-TRANSPORTING ATPASE PAA1, CHLOROPLASTIC 58 146 - -
Tpr2g2836 154 CDD HMA 72 121 IPR006121 GO:0046872
Tpr2g2836 154 ProSitePatterns Heavy-metal-associated domain. 75 104 IPR017969 GO:0046872
Tpr2g2836 154 PANTHER ATP7, ISOFORM B 58 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g2836 Tpr-Chr2 32955678 32958082 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g2836 66 148 Primary Pumps ATPases AT4G33520 63.855 1.12e-29 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g2836 K17686 - mtr:MTR_7g116990 183.726