Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g2816 ATGGATGGAACAAACAGAGGAGAAGCTGAACGATGGTTATACACAGCAAACAAACTTCTCAGCGCGCGTGATCTACACGGTGCCCGTTCATTCGCTATTCGGGCAAGAGAATCCGACCCGAGATTCGAAGCAACGGAGCTTCTTATCGCCGTTATCGATACTCTGTTAGCCGGTGAAGCGAGGATCAAAGAACATCTTGATTATTACGCCGTTCTTCAAATCATTCGTTATACTCAGAACATTGAGTATATCGCTGATCAATATCGCCGCCTTGCTATCCTCCTTGACCCTAATCGGAACCCTTTCGCTTATGCTGCTCACGCTTTTTCACTTGTTCATGATGCTTGGTCGATTTTCTCAAATCCGCATAAGAAAGCTATTTATGATGAACAGCTTCATTTTCTTACTCAACCGCCACCACCACAGCAGCAACAACAACAACAACAACCGATTCAACCACCGCCGCAACAGCAACAGCAGTTTTTTCAACCTCCTTCACCACCGCCGCCGCAACAGCCGCAACAGCCGCAACAGATTCAACCTCCTCATCCTCAGGTTCAAGTGAATCACAATCAAAGTCACAATCAGAGGAAAAACCCTAGGTCAACTAATGAAGACAGGGTAATTTATGAGGAGCAGAACAATGGGCCGAGTTATGACAATGCTGATGAGCCTACTGGGCCTAGGCCCAGGCCTGAGCCTGCTGTGGATAGGCAGGGTGGAACTGACGGTGGAAGTTTCTGGACAGCGTGTCCTTACTGTTTTGGCATGTTTGAGTATCCTAAGGTTTATGAGGATTGTACTCTCCGGTGTCAGAATTGTAGGAGGGGGTTTCATGGGTTGGCCGTGCGGGCACCGCCAGAGCTTAGTGAAGATGATGGGGGGAAAGACGGCGGTTCGTTTTGCAGCTTTGGGTATTTTCCTTTAGGATTTACTGGAAATTTTAAGGATATCAGTGGGTCGACTTCGGAATGGAACCCTATTTCTCCTTTGTTTCCTTGCCCTGGTAATTCCAAGAAGAATGCTAGGAAGGGGCCTGTTAGCTATTATGATCATGATACATGTGCGGCGTTTGCGGAGCTTTCGGATGAAACTGAGGATGATACTGATGATGATGATTGGAGGAATGGGAATGGTACCTCAGGGAAGAAGACGAGTAGGAGGAGGAGGAGGAGAAGAAGGACTTTTGGTGGCGGTGCTGGTGATGAAAGGAGACCGGTTGATAGGCCAAGGAGGGTGGTTCAGAATGGTAATGCTGGAAATGATAATGGTGGTGATAGTGATAATGTGGTTGATGGTGAGGCTGTTGATGCTGCTTCTGCGCCTAGAATGCTGTCGAATGTTGAAGCTAGTAAGAGAGCTGTGTTGAGTGGTTCTAGGAGGAGGGGTGCTGGAAATTTGGGTAAGTTGGATTTGAATGTGGAGTTTAGCAATGAGGTGGAAGAAGCTGCTGCTGCTGGAATGAAAGAAGGGCATGTGAATGGGACTGGAAATGCTGAGGATAATATTGAAGGAATTGGGTTTTTTGAAGGGCTTGATGAGTTCCTTAATAGCTTACCAATTCTTAATGTTGTTGCAGATGATAAGGTTAAGTGTCATTAG 1602 0.4682 MDGTNRGEAERWLYTANKLLSARDLHGARSFAIRARESDPRFEATELLIAVIDTLLAGEARIKEHLDYYAVLQIIRYTQNIEYIADQYRRLAILLDPNRNPFAYAAHAFSLVHDAWSIFSNPHKKAIYDEQLHFLTQPPPPQQQQQQQQPIQPPPQQQQQFFQPPSPPPPQQPQQPQQIQPPHPQVQVNHNQSHNQRKNPRSTNEDRVIYEEQNNGPSYDNADEPTGPRPRPEPAVDRQGGTDGGSFWTACPYCFGMFEYPKVYEDCTLRCQNCRRGFHGLAVRAPPELSEDDGGKDGGSFCSFGYFPLGFTGNFKDISGSTSEWNPISPLFPCPGNSKKNARKGPVSYYDHDTCAAFAELSDETEDDTDDDDWRNGNGTSGKKTSRRRRRRRRTFGGGAGDERRPVDRPRRVVQNGNAGNDNGGDSDNVVDGEAVDAASAPRMLSNVEASKRAVLSGSRRRGAGNLGKLDLNVEFSNEVEEAAAAGMKEGHVNGTGNAEDNIEGIGFFEGLDEFLNSLPILNVVADDKVKCH* 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g2816 533 MobiDBLite consensus disorder prediction 396 411 - -
Tpr2g2816 533 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 1 158 - -
Tpr2g2816 533 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 166 532 - -
Tpr2g2816 533 Pfam DnaJ domain 67 129 IPR001623 -
Tpr2g2816 533 ProSiteProfiles dnaJ domain profile. 67 132 IPR001623 -
Tpr2g2816 533 Gene3D DnaJ domain 65 167 IPR036869 -
Tpr2g2816 533 MobiDBLite consensus disorder prediction 138 240 - -
Tpr2g2816 533 SUPERFAMILY Chaperone J-domain 62 134 IPR036869 -
Tpr2g2816 533 MobiDBLite consensus disorder prediction 181 198 - -
Tpr2g2816 533 MobiDBLite consensus disorder prediction 157 180 - -
Tpr2g2816 533 SMART dnaj_3 66 124 IPR001623 -
Tpr2g2816 533 CDD DnaJ 67 121 IPR001623 -
Tpr2g2816 533 PANTHER CHAPERONE DNAJ-DOMAIN PROTEIN 1 158 - -
Tpr2g2816 533 PANTHER CHAPERONE DNAJ-DOMAIN PROTEIN 166 532 - -
Tpr2g2816 533 MobiDBLite consensus disorder prediction 363 430 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g2816 Tpr-Chr2 32681800 32683792 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g2816 8 531 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT5G64360 38.333 3.41e-96 298
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g2816 - - gmx:100788733 463.381