Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g2808 ATGGTTGTGCACGCAAAGCAGCTGCTGCTGACGGTTGTTATTACAGTCTTTTTTGCAAGAGCAGGAACTCAGCAGCTATTATCTCTGCCAAACTGCCCAACAAAGTGTGGCTCTGTCACCATTCCCTTCCCATTTGGAACCACCAAGGACTGTTCCTTGGACAGCACCTTTCTCATCAATTGCAACAAAACATCTTCAACGCATGTACCTTTCTTGCCGCAGAGTAATCAAAGTGTCCTAAACATCTCACTCGATGGTGAACTGCGCGTTGCATGGCCAGTAGCAAGTGATTGTTATGCTGAAAAGAGCGAACAGGTGAACGAGACATATTGGGATATCAACATGACACATTTTTCTGTCTCGTCAACTCGAAACAAGTTTGTCGCAGTTGGATGTGACACGCTTGCATTACTAGCAACATATGATTCTGAAGGGAAAAACTACAGCACAGGATGTATGGCTTTGTGCAATAGGCTAAATGATATTGTGGCCAATGAATCTTGCTCCGGCACTGGTTGTTGCAAGGTTTCAATACCCCAAGATCATGTGTTGACAAATGTAACCTATGGTACTCTAGGTGTATTCAACAATCACTCAGCAGTACATGATTTCAATCCATGTGGTTATGCTTTTTTGGTTGAAAATGGAGCCTACAGTTTCACATCCACAGACCTCCTCAAGTTGGAGAAGGAGGAGTTTCCGGTGTTGTTGGATTGGGCAGTAGGGAACCAAACGTGCCAGCAAGCTCAAAAGGATCTTTCAAATTATGCCTGTAAGGACAACAAAAGTACATGTTACGATGCAACCGAGAGATCTGGTTACCTTTGCAGATGCTTCAATGGATATTGGGGAAATCCTTACCTGATTCATGGTTGCCAAGATATTAATGAATGCACGGAGTCCAATGACTGTGTTGAGGGGGCAACATGCATCAATCTTCCAGGAAGCTACCAGTGTTTATGTCCGGTTGGATACGAGGGAAATGGGAAGATGAATGGAACAAAATGCAGCTCAAAATCAAGTACCAAATCAAGGAAAGAGATCATATTGATTATTGCATTGAGTGTCAGCATAAGCCTCGTAACACTACTGGTTGGAAGCTTTTATGCATATTTGGCAATGAAGAAAAGAAAGCACATTAAACTTAAAGAACAATTCTTTCAACAAAACGGCGGCTTACTGTTACAACAACAACTAGTGAGACATGGAGGGTCAAATGAAACAGCTAAAGTCTTCACTGTTGAGGAACTAAATGAAGCAACCGACAACTTCGATGAAGGCAAGATCCTAGGCCAAGGTGGTCAGGGAACAGTTTACAAAGGAGTTTTACAAGATAAAAGAATTGTAGCAATAAAGAAGTCCAAAATCAGTGATCCAAAACAGATTGAGCCGTTCATCAATGAAGTGATCGTGCTTTCCCAAATCAACCATAGAAATGTGGTAAAGCTCTTGGGTTGTTGTTTAGAGACAGAAGTTCCCTTGCTTGTGTATGAATTCATTTCCAATGGAACTGTTCATGAGCATCTTCATGATCAAAATCAATCTTTAAAGCTCACATGGAAAACAAGATTGAGAATAGCAAAAGAAACTGCTGGAGTCTTGGCATACTTGCATTCCGCAGCATCTTCACCAATCATACACAGAGATGTGAAATCTACAAATATACTCCTAGATGACAATCTCACCGCAAAGGTTTCTGATTTCGGAGCTTCTAGGATTGTTCCTCTTGATCATAGTCAAATAAAAACCCTAGTGCAGGGGACATGGGGGTACCTTGACCCGGAATATTTCCATACAAGCAAATTAACAGAAAAGAGTGACGTTTATAGCTTTGGGGTTGTACTAGCAGAGCTACTGACAGGAAAGAAAGCACTATCTTTTAGCAGGCCGGAGCTAGATAGAAACCTTGCAGTGTATTTTGTTTCTTCGATGAAAGAGGGTCGATTACATCATATTTTGGACAGAAATATAGATGAGGCGAATAATGAGCAACTAAAGGAAGTTGCCCATATTGCAGAAAGATGTTTAAGAGTGAAGGGTGAGAAAAGACCAACCATGAAAGAAGTGGCAATGGAATTAGAGGCAATATTAGTTTTTGAAGAGCATCCTTGGGGAAGTGGCAATTTGTGTTCAGAAGAGACTGATAACTTGTTCAGAGCAGCAACATCGGTTATCAGTGTTGAAAATGGTGGCAATAATTCTCCAAACTCATAG 2214 0.4133 MVVHAKQLLLTVVITVFFARAGTQQLLSLPNCPTKCGSVTIPFPFGTTKDCSLDSTFLINCNKTSSTHVPFLPQSNQSVLNISLDGELRVAWPVASDCYAEKSEQVNETYWDINMTHFSVSSTRNKFVAVGCDTLALLATYDSEGKNYSTGCMALCNRLNDIVANESCSGTGCCKVSIPQDHVLTNVTYGTLGVFNNHSAVHDFNPCGYAFLVENGAYSFTSTDLLKLEKEEFPVLLDWAVGNQTCQQAQKDLSNYACKDNKSTCYDATERSGYLCRCFNGYWGNPYLIHGCQDINECTESNDCVEGATCINLPGSYQCLCPVGYEGNGKMNGTKCSSKSSTKSRKEIILIIALSVSISLVTLLVGSFYAYLAMKKRKHIKLKEQFFQQNGGLLLQQQLVRHGGSNETAKVFTVEELNEATDNFDEGKILGQGGQGTVYKGVLQDKRIVAIKKSKISDPKQIEPFINEVIVLSQINHRNVVKLLGCCLETEVPLLVYEFISNGTVHEHLHDQNQSLKLTWKTRLRIAKETAGVLAYLHSAASSPIIHRDVKSTNILLDDNLTAKVSDFGASRIVPLDHSQIKTLVQGTWGYLDPEYFHTSKLTEKSDVYSFGVVLAELLTGKKALSFSRPELDRNLAVYFVSSMKEGRLHHILDRNIDEANNEQLKEVAHIAERCLRVKGEKRPTMKEVAMELEAILVFEEHPWGSGNLCSEETDNLFRAATSVISVENGGNNSPNS* 738
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g2808 737 SUPERFAMILY EGF/Laminin 293 329 - -
Tpr2g2808 737 SUPERFAMILY Protein kinase-like (PK-like) 408 693 IPR011009 -
Tpr2g2808 737 ProSiteProfiles EGF-like domain profile. 294 337 IPR000742 -
Tpr2g2808 737 ProSitePatterns Serine/Threonine protein kinases active-site signature. 545 557 IPR008271 GO:0004672|GO:0006468
Tpr2g2808 737 Pfam Protein tyrosine and serine/threonine kinase 427 693 IPR001245 GO:0004672|GO:0006468
Tpr2g2808 737 ProSiteProfiles Protein kinase domain profile. 424 705 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g2808 737 Gene3D Phosphorylase Kinase; domain 1 400 499 - -
Tpr2g2808 737 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 310 321 IPR000152 -
Tpr2g2808 737 Gene3D Laminin 243 336 - -
Tpr2g2808 737 CDD EGF_CA 294 327 - -
Tpr2g2808 737 SMART serkin_6 424 696 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g2808 737 SMART egf_5 297 337 IPR000742 -
Tpr2g2808 737 SMART egf_5 245 293 IPR000742 -
Tpr2g2808 737 Pfam Wall-associated receptor kinase galacturonan-binding 32 90 IPR025287 GO:0030247
Tpr2g2808 737 Gene3D Transferase(Phosphotransferase) domain 1 500 703 - -
Tpr2g2808 737 ProSitePatterns Calcium-binding EGF-like domain signature. 294 319 IPR018097 GO:0005509
Tpr2g2808 737 CDD STKc_IRAK 430 696 - -
Tpr2g2808 737 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 16 723 IPR045274 GO:0007166
Tpr2g2808 737 SMART egfca_6 294 337 IPR001881 GO:0005509
Tpr2g2808 737 Pfam Calcium-binding EGF domain 294 336 IPR001881 GO:0005509
Tpr2g2808 737 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 16-RELATED 16 723 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g2808 Tpr-Chr2 32614807 32619320 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g2808 13 704 Receptor kinase-like Gene Family AT1G21230 49.787 0.0 650
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Tpr2g2808 Pkinase 3.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g2808 - - mtr:MTR_3g088780 1019.22