Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g2803 ATGGCAACTTCTCATTTTTCAACGCAACCTTATCCCCTGAGGGTTCCGAATCTCATTGGGGGCAAGTTTGTTGAGTCAAAATCATTGACTTTTATAGATGTTATAAACCCTGCAACACAAGAAGTTGTTTCACAAGTTCCTTTGACTACAAATGAAGAGTTTAAAGCTGCAGTGGCTGCAGCAAAGAAGGCATATCCATCATGGCGTAACACTCCAATCACGAAACGCCAACGTGTTATGTTGAAGTTCCAGGAGCTTATACGCAGAGATATGGATAAACTTGCCCTGAATGTGACAACTGAACAAGGAAAGACGTTGAAGGATGCGCAAGGAGATGTATTCCGTGGTTTAGAGGTGGTGGAACATGCTTGTGGGATGGCAACGCTACAGATGGGAGAGTATGTTTCCAATGTATCACATGGAATTGATACTTTTAGCATTAGAGAACCACTCGGTGTTTGTGCCGGTATCTGTCCTTTTAACTTTCCTGCAATGATTCCCCTCTGGATGTTCCCAGTGGCAGTTACCTGTGGCAATACTTTCATCCTAAAACCATCAGAGAAAGATCCAGGTGCTTCTATGCTTCTTGCGGAATTGGCAATGGAGGCTGGTTTGCCCGAGGGCGTCTTAAATATAGTTCACGGAGCCCATGATACTGTGAATGCTATTTGTGATCATGATGACATCAAAGCTATATCTTTTGTTGGTTCAAATGTTGCGGGAATGCACATATATGCAAGAGCAACAGCTAAAGGGAAGCGTGTTCAGTCTAATATGGGGGCCAAAAATCACGCGGTTGTCATGCCGGATGCAAGTGTTGATGCAACTATAAATGCTTTAATTGCTGCGGGTTTTGGTGCTGCTGGACAAAGGTGCATGGCTCTAAGCACAGTTGTTTTTGTTGGAGGCTCAAAACCATGGGAAAGTATAACTGTGGAGCGTGCCAAAGCTCTTAAAGTAAACGCCGGAACTGAACCTGATGCAGACCTTGGACCAGTCATTAGCATACAGGCAAAGGAGCGAATTCACAGATTAATTCAATCTGGATTTGAAAGTGGGGCAAGACTATTGCTTGATGGAAGAAGTATAGTGGTCCCCGGATATGAATCTGGCAATTTTATTGGCCCAACCATCTTAGCAGATGTTAGTTCCAACATGGAGTGCTACAAGGAGGAGATTTTTGGCCCAGTTCTTCTTCTCATGGAGGCTGATAGCTTGAAAGAGGCCATAAACATTGTCAACGGAAACAAGTATTTTGTTAATAACTATCCCGCGTCATTTGCTTTTGTTAAACTTCTACTTATCTCTTACTCTGACTTTTGCAACAGGTATGGAAATGGTGCTACTATATTCACTAGATCTGGTGTCGCTGCAAGGAAATTTCAGACCGAAATCGAGGCAGGGCAGGTGGGCATCAATGTTCCTATTCCCGTTCCTTTGCCGTTTTTCTCCTTTACTGGCAACAAGGCATCATTTGCGGGCGATCTTAATTTCTATGGCAAGGCAGGGGTCAACTTTTATACACAAATCAAAACAGTAACTCAGAATTGGAAGGACTCAGATAGTGAAGACAAGATTAACATGGCAATGCCAACCTCTCAAAAATCTTAA 1611 0.432 MATSHFSTQPYPLRVPNLIGGKFVESKSLTFIDVINPATQEVVSQVPLTTNEEFKAAVAAAKKAYPSWRNTPITKRQRVMLKFQELIRRDMDKLALNVTTEQGKTLKDAQGDVFRGLEVVEHACGMATLQMGEYVSNVSHGIDTFSIREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFILKPSEKDPGASMLLAELAMEAGLPEGVLNIVHGAHDTVNAICDHDDIKAISFVGSNVAGMHIYARATAKGKRVQSNMGAKNHAVVMPDASVDATINALIAAGFGAAGQRCMALSTVVFVGGSKPWESITVERAKALKVNAGTEPDADLGPVISIQAKERIHRLIQSGFESGARLLLDGRSIVVPGYESGNFIGPTILADVSSNMECYKEEIFGPVLLLMEADSLKEAINIVNGNKYFVNNYPASFAFVKLLLISYSDFCNRYGNGATIFTRSGVAARKFQTEIEAGQVGINVPIPVPLPFFSFTGNKASFAGDLNFYGKAGVNFYTQIKTVTQNWKDSDSEDKINMAMPTSQKS* 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g2803 536 PANTHER METHYLMALONATE-SEMIALDEHYDE DEHYDROGENASE 442 536 - -
Tpr2g2803 536 PANTHER METHYLMALONATE-SEMIALDEHYDE DEHYDROGENASE 1 418 - -
Tpr2g2803 536 SUPERFAMILY ALDH-like 7 519 IPR016161 GO:0016491
Tpr2g2803 536 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 285 296 IPR016160 GO:0016491
Tpr2g2803 536 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 442 479 IPR016163 GO:0016620
Tpr2g2803 536 Pfam Aldehyde dehydrogenase family 443 513 IPR015590 GO:0016491
Tpr2g2803 536 Pfam Aldehyde dehydrogenase family 23 418 IPR015590 GO:0016491
Tpr2g2803 536 TIGRFAM MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 17 418 IPR010061 GO:0004491
Tpr2g2803 536 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 480 512 IPR016162 GO:0016491
Tpr2g2803 536 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 260 418 IPR016163 GO:0016620
Tpr2g2803 536 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 19 259 IPR016162 GO:0016491
Tpr2g2803 536 CDD ALDH_F6_MMSDH 15 517 IPR010061 GO:0004491
Tpr2g2803 536 PANTHER MALONATE-SEMIALDEHYDE DEHYDROGENASE 442 536 IPR010061 GO:0004491
Tpr2g2803 536 PANTHER MALONATE-SEMIALDEHYDE DEHYDROGENASE 1 418 IPR010061 GO:0004491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g2803 Tpr-Chr2 32565327 32576994 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g2803 7 501 Aldehyde Dehydrogenase Gene Family AT2G14170 78.427 0.0 786
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g2803 K00140 - gmx:100783569 884.404