Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g2792 ATGGAAAACTATTCATATCAATCATATCCAGATTCAGGTAACTCATCACCACGTTCGAGAGAAATCGAGTTCGAAAACCCACCCACTGGAACAACAACAACAGCACCATGGGAAGATCAACAACAAAACCAAACAAGCAGCTACAAAGCAAAATTCATGTGCAGCTATGGTGGCAAAATCCAACCAAGAACACACGACAATCAACTCTCTTACGTTGGTGGTGAAACTAAAATCCTAGCCGTTGATCGTAACATCAAGTTTCCTTTAATGATCTCAAAGCTCTGTTCTCTCATCGAAGCACCTGATGTTTCCTTTAAATACCAACTCCCTGGCGAAGATCTCGATGCACTTATCTCAGTAACTAACGACGATGATCTTGATCACATGATGCATGAATATGATCGTCTCTACCGTGCTTCCGCTAGACCCGCTCGTATGCGATTATTTCTTTTTGTTAACGATTCTGATTCTGTTTCAAATCCACCCGACCCGGTTAAACCGAATAACGTTGATTATTTATTCGGAATTGAAAAGCCTGTAACCGTTGTTGCTCCGCCACCTACTGCCGTTAAATTTCACGATCCTGTTCCAGAACCGGTTGCTCCGTTACCTGAGTATCATAATCATGTTCGACCCGGTTTGAATCCTGACCGGGTTGTAGGTTCGGATCCAGGTTTGAACCATCCGCTTGAGATTCAGAGGCAGTTACAACGGATGCAGATTGCGGAGAATGAACAAACTGGTTACAGGAGGAAAAGTGAAGATTATCCCGCCGGAGATTATTACGTTCAGAAAGTGCCGGAGAAATTTCCGGCGATGTCGAATTTCTCACCACCACCGCCGCAGCATCAACAGCAACATCAGCAGCAGCATCAACCTGGTTATTGGCAAGAAAAACCTGTTTCCGGCGAGGCTTATCCACCGGGAGTGTCAGGAGGAGGTGATCCGGCGGTTTATATGGTTCCGGCGCCGGGAACTTTCTATCACACGCCGGTGATGCGTCCACCGGCAACTCAAGGTTACTACACGGTGCAACGAATGCCGTCTGATGCTTACCGTGAAGCGCAGGTTTACGGTGGCGCTCCGCCGTCTAAAGCGCCGTTTTCGTCGGGAGCTTCGGTGACTTATGCACCGGCGCAGCCGGTTAAAGGTCCTGTTTATGGTGAAGGAGTTAGTGTGGTTCGTTCGAGTGGGATACCGGATAATACGGTAAATTCATACGCACATTTGGCGTATGATAGTGCAAGTGGCAGACAAGTTTATTATAATGCGCCGGGTGGTGTAGTACACGCTCCTCCGTACCAAGGAGTTGCTGCACCTGTTACCACAGACGTTAAAGTGATGAGCAAGATTTCTCAAGGTTCAGTGTGA 1371 0.4726 MENYSYQSYPDSGNSSPRSREIEFENPPTGTTTTAPWEDQQQNQTSSYKAKFMCSYGGKIQPRTHDNQLSYVGGETKILAVDRNIKFPLMISKLCSLIEAPDVSFKYQLPGEDLDALISVTNDDDLDHMMHEYDRLYRASARPARMRLFLFVNDSDSVSNPPDPVKPNNVDYLFGIEKPVTVVAPPPTAVKFHDPVPEPVAPLPEYHNHVRPGLNPDRVVGSDPGLNHPLEIQRQLQRMQIAENEQTGYRRKSEDYPAGDYYVQKVPEKFPAMSNFSPPPPQHQQQHQQQHQPGYWQEKPVSGEAYPPGVSGGGDPAVYMVPAPGTFYHTPVMRPPATQGYYTVQRMPSDAYREAQVYGGAPPSKAPFSSGASVTYAPAQPVKGPVYGEGVSVVRSSGIPDNTVNSYAHLAYDSASGRQVYYNAPGGVVHAPPYQGVAAPVTTDVKVMSKISQGSV* 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g2792 456 SUPERFAMILY CAD & PB1 domains 65 161 - -
Tpr2g2792 456 SMART PB1_new 64 153 IPR000270 GO:0005515
Tpr2g2792 456 PANTHER OCTICOSAPEPTIDE/PHOX/BEM1P 1 449 - -
Tpr2g2792 456 MobiDBLite consensus disorder prediction 1 43 - -
Tpr2g2792 456 PANTHER OS05G0427100 PROTEIN-RELATED 1 449 - -
Tpr2g2792 456 CDD PB1_UP2 53 151 - -
Tpr2g2792 456 Pfam PB1 domain 65 152 IPR000270 GO:0005515
Tpr2g2792 456 Gene3D - 70 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g2792 Tpr-Chr2 32441395 32443320 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g2792 48 151 MAP Kinase Kinase Kinase AT5G57610 49.038 1.02e-25 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g2792 - - gmx:100780332 552.747