Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g2761 ATGGGTGGAAGAATAGAATGGGTGAAGGGCAAAATGGTTGGATGTGGATCTTTTGGCAGTGTTCATCTAGCCATGAATAAATCGAACGGTGGACTTTTCGTAGTGAAAACATCAGATTCAGAGGTAGGACGTGATGCTCTAAAGAACGAGGTGAATATACTAAATAGTTTAAATAATTCATCACCCTATATTGTCCAATGTTTAGGGACAGAGTATGATGATGAAGATAAGAAAGTAGTGAATGTTTTCATGGAATATATGGCCGGGGGTAGTTTGGCTGACGTGTCGAACAAATTTGGTGGTTCATTAGATGAAGATGTTGTACGTTTGTATACTAGACAAATTCTCCTTGGGTTATATGATCTTCACAAACATGGAATTGTGCATTGTGACCTTAAGTGCAAAAATGTGCTTTTGGCCTCTTCTGGGAACGTCAAGCTGGCTGATTTAGGGTGTGCAAAAAGGGTAGAGAACAAATCATCATCATCATGTATTAATCTTACTAATGGTGGCACTCCTCTATGGATGGCTCCTGAAGTATTATTAAATGGTGATGAGAAAGTTGTCGATTTTGCTGCAGATATATGGTCTTTGGGGTGTACTGTTATTGAAATGGCCACCGGCAGGCCTCCTTGGGCTGACATTTCAAATCCAATTGCTGCTATGTTTAAGATTGCTCGCGGTGATGAGATACCTCAATTTCCACTTCATTTCTCTCAGGAAGGTTTCGATTTCTTGAGGAGGTGTTTGGTGAGAGATCCCAGTAAGAGGCCTACCGCACAGGAGTTACTTAACCACCCATTTATTATTTCAACTAATTTAACTCATCACAAACACTACTCTGCTTCCTCACCTGCAGCTGTTTTGGATGTTCATCAATTTGAGTATACCGATGACGACGATGACGACGAAGAATTATTACAAAGCCCAATTACAGGACGATTGAACCTGTTCTCTTCCACCACAAATGAGTTTGTGTCCCCACAAGGAACAACAATGTGGGAACTGGAAGATGGTGCATCAGGGAATCATTGGATCACTGTTAGATAA 1050 0.4086 MGGRIEWVKGKMVGCGSFGSVHLAMNKSNGGLFVVKTSDSEVGRDALKNEVNILNSLNNSSPYIVQCLGTEYDDEDKKVVNVFMEYMAGGSLADVSNKFGGSLDEDVVRLYTRQILLGLYDLHKHGIVHCDLKCKNVLLASSGNVKLADLGCAKRVENKSSSSCINLTNGGTPLWMAPEVLLNGDEKVVDFAADIWSLGCTVIEMATGRPPWADISNPIAAMFKIARGDEIPQFPLHFSQEGFDFLRRCLVRDPSKRPTAQELLNHPFIISTNLTHHKHYSASSPAAVLDVHQFEYTDDDDDDEELLQSPITGRLNLFSSTTNEFVSPQGTTMWELEDGASGNHWITVR* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g2761 349 CDD STKc_MAPKKK 6 269 - -
Tpr2g2761 349 Gene3D Transferase(Phosphotransferase) domain 1 6 310 - -
Tpr2g2761 349 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE NPK1-LIKE 6 349 - -
Tpr2g2761 349 ProSitePatterns Protein kinases ATP-binding region signature. 13 36 IPR017441 GO:0005524
Tpr2g2761 349 SUPERFAMILY Protein kinase-like (PK-like) 7 319 IPR011009 -
Tpr2g2761 349 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 6 349 - -
Tpr2g2761 349 SMART serkin_6 7 269 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g2761 349 ProSitePatterns Serine/Threonine protein kinases active-site signature. 127 139 IPR008271 GO:0004672|GO:0006468
Tpr2g2761 349 ProSiteProfiles Protein kinase domain profile. 7 269 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g2761 349 Pfam Protein kinase domain 9 269 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g2761 Tpr-Chr2 32158133 32159182 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g2761 7 290 MAP Kinase Kinase Kinase AT5G55090 45.172 1.23e-69 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Tpr2g2761 Pkinase 5.2e-60 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g2761 K20716 - mtr:MTR_2g005290 520.776