Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g2758 ATGGAGTGGGAGGAGGAAATAGAGGAAAGGATTGAGATAGTCTGTAATGATCACAACAATGATGATCACATGATGAATCAGAAACAACCGTTATTGTTGAGAAGGAGAATCAATAACTCTTCTCAGCAGGCTATTGTTGGAGCCAATATTTGTCCCATTCAAAGTCTTGATTATGAGTTAATTGAGAATGATCTGTTGAAGCAGGATTGGAGGTCAAGAACCAAGGTTGAGATATACCAATATGTTGTTCTGAAATGGAGCCTTGCACTTCTTATTGGTTTAATTACTGGATTTGTTGGGTTTTTTAACAACCTTGGAGTTGAGAATATTGCTGGTTTCAAACTTTTACTCACCAACAATCTCATGCTCAAGCAAAAGTATCATGAGGCATTTGCAGCATATGTCGCTTGTAACATGATTTTAGGGGCTGCGGCTGCAGCCCTGTGTGCTTATATTGCCCCTGCAGCAGCAGGTTCCGGCATACCAGAGGTAAAGGCATACCTCAATGGCATTGATGCGCATTCTATATTGGCTCCGTCTACCCTTTTTGTCAAGATATTTGGTTCAATTTTAGGAGTTGCTGCTGGTTTCGTTGTGGGGAAAGAAGGACCCATGGTACATACAGGTGCTTGCATTGCTAATTTACTCGGACAAGGCGGTTCTCGTAAATATCGACTCACCTGGAAATGGCTCAGATACTTCAAAAATGATAGAGATCGAAGGGATTTGATCACTTGCGGTGCAGCTGCAGGTGTTGCCGCTGCCTTCCGTGCTCCTGTTGGTGGTGTTCTTTTCGCACTCGAAGAAGCTGCTTCGTGGTGGAGGAGTGCTCTTCTATGGCGTACATTCTTTACCACTGCTGTAGTAGCAGTTGTTTTAAGGAGTTTTATACAATTTTGTCATCAAGGAGGAGGCAAATGCGGTCTCTTTGGCGAAGGAGGACTCATAATGTTTGATGTTAATTCTGCAAAGCCTTCCTACACCACATTTGATCTACTCACAGTTATATTTCTCGGAGTCATTGGAGGTCTTATGGGAAGCCTTTACAATTATCTTGTTGATAAAGTCCTTCGCACTTACACCGCTATAAATGAGAGAGGTCCAATATTCAAGATTTTACTGGTGATGATTATCTCGATTGTGACATCTTGTATTCGATTTGGGCTTCCGTTGCTATCAAAGTGTGTGCAATGTCCAGGGGAGTGCCCTAGCCCCCCAACCGCAGGTTTCTCAATACACTACGACAATTTTCAATGTCCACCCAACCACTACAATGATCTCAGTTCTCTCCTTTTCACCACTAACGACGATGCCATCCGCAACCTGTTCAGTAATGGCTCCGACTCTGCCAATGCCGGATTTCAACTTTCAACTCTCATAATTTTCTTCGTGGCAATATACTTGCTTGGAATTGTGACATACGGTGCTGCCATTCCCTCTGGTCTATTCATTCCAGTCATACTTGCTGGAGCTTCCTATGGGCGTCTAATAGGGACTGTGTTGGATCAATTCACAGTTCTTGATACTGGTTTGTTTGCTCTCCTTGGAGCAGCATCCTTCCTTGGTGGAACCATGAGAATGACAGTTTCTCTCTGTGTCATACTTCTTGAGCTCACGGATAACTTGTTGATGCTACCATTGGTCATGTTGGTTCTCCTCATTTCTAAAACAGTGGCCGATTGTTTTAACAAAGGTGTTTATGATCAGATTGTGGAGTTCAAGGGACTGCCTTATATGGAAGCACATGCAGAGCCGTACATGAGGAATTTAGTTGCAGGCGACGTTGTTTCTGGTCCACTGTTTTCTTTTTGTGGGATCGAGAAAGTGGGGAATATTGTTCATGCTTTGAAGGTGACAAAACATCATGGATTTCCTGTAATTGACGAGCCTCCTTTGACGGATTCTCCTGAGTTGTGTGGGTTGGTATTAAGGTCTCATCTGTTGGTACTTCTCAAGCACAAGACATTGTTCACTAGGGAGAGAGTGTTGACAGGATCTACCATTATGAACAAGGTTAAGGCAAGTGATTTTGCAAAACCGGGTTTAGGGAGAGGGATAATAAGGGTGGAGGATTTAGACATTTCACAAGAGGATATGGAAATGTTTGTTGATCTTCATCCAATCACTAATACATCTCCATATACTGTTGTTGAAACAATGTCTCTTGCAAAAGCTGCTCTTCTTTTCCGGGAGCTTGGACTCAGGCACTTGCTCGTCGTGCCCAAGAAACCAGGAAGGCCTCCAATTGTTGGGATCCTGACAAGGCATGATTTCATGTCTGAGTATATCTTGGGGCTATTCCCCAACTTGAATCAAGACTAA 2322 0.4324 MEWEEEIEERIEIVCNDHNNDDHMMNQKQPLLLRRRINNSSQQAIVGANICPIQSLDYELIENDLLKQDWRSRTKVEIYQYVVLKWSLALLIGLITGFVGFFNNLGVENIAGFKLLLTNNLMLKQKYHEAFAAYVACNMILGAAAAALCAYIAPAAAGSGIPEVKAYLNGIDAHSILAPSTLFVKIFGSILGVAAGFVVGKEGPMVHTGACIANLLGQGGSRKYRLTWKWLRYFKNDRDRRDLITCGAAAGVAAAFRAPVGGVLFALEEAASWWRSALLWRTFFTTAVVAVVLRSFIQFCHQGGGKCGLFGEGGLIMFDVNSAKPSYTTFDLLTVIFLGVIGGLMGSLYNYLVDKVLRTYTAINERGPIFKILLVMIISIVTSCIRFGLPLLSKCVQCPGECPSPPTAGFSIHYDNFQCPPNHYNDLSSLLFTTNDDAIRNLFSNGSDSANAGFQLSTLIIFFVAIYLLGIVTYGAAIPSGLFIPVILAGASYGRLIGTVLDQFTVLDTGLFALLGAASFLGGTMRMTVSLCVILLELTDNLLMLPLVMLVLLISKTVADCFNKGVYDQIVEFKGLPYMEAHAEPYMRNLVAGDVVSGPLFSFCGIEKVGNIVHALKVTKHHGFPVIDEPPLTDSPELCGLVLRSHLLVLLKHKTLFTRERVLTGSTIMNKVKASDFAKPGLGRGIIRVEDLDISQEDMEMFVDLHPITNTSPYTVVETMSLAKAALLFRELGLRHLLVVPKKPGRPPIVGILTRHDFMSEYILGLFPNLNQD* 774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g2758 773 CDD ClC_6_like 54 579 - -
Tpr2g2758 773 Pfam CBS domain 710 760 IPR000644 -
Tpr2g2758 773 SUPERFAMILY Clc chloride channel 63 581 IPR014743 -
Tpr2g2758 773 PRINTS Chloride channel signature 154 171 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Tpr2g2758 773 PRINTS Chloride channel signature 185 204 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Tpr2g2758 773 PRINTS Chloride channel signature 249 268 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Tpr2g2758 773 PRINTS Chloride channel signature 478 498 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Tpr2g2758 773 PRINTS Chloride channel signature 510 526 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Tpr2g2758 773 PRINTS Chloride channel signature 528 547 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Tpr2g2758 773 PRINTS Chloride channel signature 566 580 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Tpr2g2758 773 Gene3D Clc chloride channel 77 579 - -
Tpr2g2758 773 Pfam Voltage gated chloride channel 142 560 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Tpr2g2758 773 PANTHER CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER 21 772 - -
Tpr2g2758 773 Gene3D - 580 761 IPR046342 -
Tpr2g2758 773 ProSiteProfiles CBS domain profile. 708 769 IPR000644 -
Tpr2g2758 773 CDD CBS_pair_voltage-gated_CLC_euk_bac 582 761 - -
Tpr2g2758 773 SMART cbs_1 712 763 IPR000644 -
Tpr2g2758 773 SMART cbs_1 599 652 IPR000644 -
Tpr2g2758 773 PRINTS Plant CLC chloride channel signature 59 67 IPR002251 GO:0005247|GO:0006821|GO:0016020
Tpr2g2758 773 PRINTS Plant CLC chloride channel signature 270 278 IPR002251 GO:0005247|GO:0006821|GO:0016020
Tpr2g2758 773 PRINTS Plant CLC chloride channel signature 284 294 IPR002251 GO:0005247|GO:0006821|GO:0016020
Tpr2g2758 773 PRINTS Plant CLC chloride channel signature 427 443 IPR002251 GO:0005247|GO:0006821|GO:0016020
Tpr2g2758 773 SUPERFAMILY CBS-domain pair 583 761 IPR046342 -
Tpr2g2758 773 PANTHER CHLORIDE CHANNEL PROTEIN CLC-C 21 772 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g2758 Tpr-Chr2 32134780 32138770 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g2758 21 771 Ion Channels AT5G49890 75.265 0.0 1105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g2758 K05016 - jre:108988922 1117.45