Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g2732 ATGGAACTATCATCAGATTTGCAACAAAACAATAACAAGAAGCAGCAGAAAAGAGGCACCACCACACATCCCCACCACCAACAACAAGAATCATTATCTCCACCACCTTCAAATTCTCATTCACAACAACAACACCATCTTGTGGTCCCTTTTGATGGAAGACCATCACCTTTCATTATGGGCTCCATCTCCACCAACAACACTAATTCATCTCCATCCAATTCATCTTCTTCCTCTGCTTCAGCTTCTGCAATTGACGCTTCTCTTGCTATTGCTACCAGATCTGAACCTCATTCCAACAATAACAACCAAATTCAACAATTCTCTTCTTCCACCACTACTGCCGTTGCTGTTGCTAATCCTCCTAAACGATCCACCAAGGACAGACACACTAAAGTCGACGGTCGTGGCCGGAGAATTCGAATGCCGGCGACATGTGCAGCAAGAGTTTTTCAGTTGACCAGAGAATTAGGTCACAAATCAGACGGTGAAACAATTGAGTGGCTTCTTCAACAAGCGGAGCCGGCGATAATCGCCGCTACTGGAACCGGAACAATACCCGCGAATTTCTCGACGCTCAACGTTTCACTCAGAAGTAGCGGCTCAACTCTGTCGGCGCCGCCGTCGAAATCAGCTCCTCATAGTTTTCACAGCGCACTTGCACTGGCTCATCATCCTTATGAAGAAGCTGCGTACCAACACGCGCCACTGTTAGGGTTTCATCCTCATCAACAACTCATGAACGCCGATCAAATCGGTGAAGCACTTTCAAATGAGAATTATATGAGAAAACGCTATAGAGAAGATCTTTTCAAAGACGATAACAACCAGAACAACGAAACTGGTGATGGTGATGGTTCTTCTTCTCCTAAAGGTTTCAAAACAAACCACCAACAAGATGGTACTATGGGAGAACAAGGTGAAGGTGGTGGTGGTGGAGCTTCTTCATCGTCTTCTTCTGCTTCTTCTGCTGGAAATTCTATTTCTGGACTTCTTCGACCACCATCGAATATGTTACCGGCAACAGCCATGTGGGCCACGGCAGGGAGTGGAAACACAATATGGATGGTACCGGTGACTGGCGGTGGCGGAGCGACTGCGAATTCAGAGACAGTACAGACACAAAACATGTGGCCTTTTAGTACACATCTTAATAATCAACAATCTTCTCAACAACAAGGAACACCGTCGTCTCAATTGCATTTCATGCCTCGGTTTAATGTTCCAACAGGTAATTCCGGTGGTAGTGGTGGTGTTGAATTTGAAGGTGGACGTGGTGGTGCAGGTGGTTTACAATTGGGTTCATCTGTTTATCATCAACCTTCACAGCATATTGGATTGGCAGTGTCTGATTCAAATTTGGGTATGTTGGCTGCTCTTAATGCTTATACAAGAGCTACTGCTGGTCATCATTTCAATGTGGTCAACAATTCTTCATCTTCTTCTTCAGATCATCATCATCAACAACAACCTAGTCATCATCATCATCATCATCATCATGATCATGAGAGTGGAGAAGATGCTCCTAATAGTAATAACTCACAATGA 1548 0.4464 MELSSDLQQNNNKKQQKRGTTTHPHHQQQESLSPPPSNSHSQQQHHLVVPFDGRPSPFIMGSISTNNTNSSPSNSSSSSASASAIDASLAIATRSEPHSNNNNQIQQFSSSTTTAVAVANPPKRSTKDRHTKVDGRGRRIRMPATCAARVFQLTRELGHKSDGETIEWLLQQAEPAIIAATGTGTIPANFSTLNVSLRSSGSTLSAPPSKSAPHSFHSALALAHHPYEEAAYQHAPLLGFHPHQQLMNADQIGEALSNENYMRKRYREDLFKDDNNQNNETGDGDGSSSPKGFKTNHQQDGTMGEQGEGGGGGASSSSSSASSAGNSISGLLRPPSNMLPATAMWATAGSGNTIWMVPVTGGGGATANSETVQTQNMWPFSTHLNNQQSSQQQGTPSSQLHFMPRFNVPTGNSGGSGGVEFEGGRGGAGGLQLGSSVYHQPSQHIGLAVSDSNLGMLAALNAYTRATAGHHFNVVNNSSSSSSDHHHQQQPSHHHHHHHHDHESGEDAPNSNNSQ* 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g2732 515 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 28 512 IPR005333 GO:0003700
Tpr2g2732 515 Pfam TCP family transcription factor 125 268 IPR017887 -
Tpr2g2732 515 MobiDBLite consensus disorder prediction 280 303 - -
Tpr2g2732 515 PANTHER TRANSCRIPTION FACTOR TCP8 28 512 - -
Tpr2g2732 515 MobiDBLite consensus disorder prediction 270 327 - -
Tpr2g2732 515 MobiDBLite consensus disorder prediction 25 45 - -
Tpr2g2732 515 MobiDBLite consensus disorder prediction 311 327 - -
Tpr2g2732 515 MobiDBLite consensus disorder prediction 107 134 - -
Tpr2g2732 515 MobiDBLite consensus disorder prediction 477 515 - -
Tpr2g2732 515 ProSiteProfiles TCP domain profile. 126 180 IPR017887 -
Tpr2g2732 515 MobiDBLite consensus disorder prediction 1 17 - -
Tpr2g2732 515 MobiDBLite consensus disorder prediction 1 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g2732 Tpr-Chr2 31962415 31964923 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g2732 123 380 TCP Transcription Factor Family AT1G35560 50.000 7.50e-60 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Tpr2g2732 TCP 3.7e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g2732 - - vra:106776202 396.741