Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tpr2g2731 | ATGGAAACTCACTTCAATCACACTCTCTTCGAGAGGCGCCCCTTTCTCAAGTCCAAGGCTCCTGCAATTAAATGGGTCAAACAATGGGTTCCCCAAGATGTTGTGGCTACTGGTGGGAAGTGCATGCTCTTAAGATGGGTAACAGAGGACACTATAAAGGCCTTGAAAGAGAAGGAGAAAGAACCTTTAGCTCCTGAGCCAGAACCCGAGCCAACTACTGAAGTACTTTTCCTTTGCAGCTACGAAGGCTGCGGAAAGACATTTATCGATGCTGGTGCTTTGAGGAAGCATTCTCACATTCACGGAGAGAGGCAATTTGTTTGCCATTACGAGGGGTGTGGAAAGAAATTTCTTGACAGCTCAAAGTTAAAAAGACATTTCCTAATTCATACAGGGGAGAGGGATTTCGTGTGTCCTCATGAAGGCTGTGGTAAGGCCTTCTCCTTGGATTTTAACCTGAGGTCTCACATGAAGACACATTCACAAGAGAACTATCATATTTGCCCGTACCCGGATTGTGGGAAAAGATACGCTCATGAATACAAGCTAAAGAATCATATTGCTTCTCATCATGAAAAGAGTACACCAACAATGGATGTGACGCCAAAGTATACCACTCCTCCTTCAGAAAAACAAACAAAAACTGCTAAACCTTCTGGGGCAACATACGGTTCAGCATCCTCTGATCGCCCATATGCATGTCCTTATGAAGGGTGTGAAAAAGCATACATTCATGAGTATAAGCTTAAACTGCATTTGAAGAGGGAGCATCCTGGCCACATAAATGATGAAAATGCAATGCTTGCTCTGGCTAATACTGCTGAAAATGAAATGGATGAAGCAAGTGATCATGATGCTTATGGTGGGAAACGTTCCAACGGTAAAAGTCAGAAGCAAAGTAGGCCCAAGCCAAACTTGAAAATGCCTCCTTCCAAAGTTGCGCAACGAAAAGGGTCCACTCAAACTCCTACTGCCACTTTTAATATGGTTAAAAAACCTTGGCCAGTGAAAGATGAAACTTATGATGAAGACAGCGAAGAAACCGAGGAGGATCGTGACAATGTTGAAGATGGTTGGAGATATGCTGCAAACAACGAAGATGATGATGAGGAAACAGAAGATGAAGACTGA | 1131 | 0.4341 | METHFNHTLFERRPFLKSKAPAIKWVKQWVPQDVVATGGKCMLLRWVTEDTIKALKEKEKEPLAPEPEPEPTTEVLFLCSYEGCGKTFIDAGALRKHSHIHGERQFVCHYEGCGKKFLDSSKLKRHFLIHTGERDFVCPHEGCGKAFSLDFNLRSHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKSTPTMDVTPKYTTPPSEKQTKTAKPSGATYGSASSDRPYACPYEGCEKAYIHEYKLKLHLKREHPGHINDENAMLALANTAENEMDEASDHDAYGGKRSNGKSQKQSRPKPNLKMPPSKVAQRKGSTQTPTATFNMVKKPWPVKDETYDEDSEETEEDRDNVEDGWRYAANNEDDDEETEDED* | 377 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tpr2g2731 | 376 | MobiDBLite | consensus disorder prediction | 314 | 328 | - | - | |
| Tpr2g2731 | 376 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 232 | 262 | IPR013087 | - | |
| Tpr2g2731 | 376 | SMART | c2h2final6 | 232 | 257 | IPR013087 | - | |
| Tpr2g2731 | 376 | SMART | c2h2final6 | 136 | 160 | IPR013087 | - | |
| Tpr2g2731 | 376 | SMART | c2h2final6 | 166 | 190 | IPR013087 | - | |
| Tpr2g2731 | 376 | SMART | c2h2final6 | 106 | 130 | IPR013087 | - | |
| Tpr2g2731 | 376 | SMART | c2h2final6 | 77 | 101 | IPR013087 | - | |
| Tpr2g2731 | 376 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 168 | 191 | IPR013087 | - | |
| Tpr2g2731 | 376 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 108 | 130 | IPR013087 | - | |
| Tpr2g2731 | 376 | Gene3D | Classic Zinc Finger | 77 | 102 | - | - | |
| Tpr2g2731 | 376 | Gene3D | Classic Zinc Finger | 134 | 161 | - | - | |
| Tpr2g2731 | 376 | SUPERFAMILY | beta-beta-alpha zinc fingers | 80 | 130 | IPR036236 | - | |
| Tpr2g2731 | 376 | MobiDBLite | consensus disorder prediction | 276 | 376 | - | - | |
| Tpr2g2731 | 376 | SUPERFAMILY | beta-beta-alpha zinc fingers | 117 | 170 | IPR036236 | - | |
| Tpr2g2731 | 376 | MobiDBLite | consensus disorder prediction | 188 | 229 | - | - | |
| Tpr2g2731 | 376 | PANTHER | BNAA03G13270D PROTEIN | 5 | 375 | - | - | |
| Tpr2g2731 | 376 | MobiDBLite | consensus disorder prediction | 277 | 291 | - | - | |
| Tpr2g2731 | 376 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 138 | 160 | IPR013087 | - | |
| Tpr2g2731 | 376 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 234 | 257 | IPR013087 | - | |
| Tpr2g2731 | 376 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 79 | 101 | IPR013087 | - | |
| Tpr2g2731 | 376 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 106 | 135 | IPR013087 | - | |
| Tpr2g2731 | 376 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 166 | 196 | IPR013087 | - | |
| Tpr2g2731 | 376 | PANTHER | TRANSCRIPTIONAL REPRESSOR PROTEIN YY | 5 | 375 | - | - | |
| Tpr2g2731 | 376 | Pfam | Zinc finger, C2H2 type | 136 | 160 | IPR013087 | - | |
| Tpr2g2731 | 376 | Pfam | Zinc finger, C2H2 type | 166 | 190 | IPR013087 | - | |
| Tpr2g2731 | 376 | Gene3D | Classic Zinc Finger | 103 | 133 | - | - | |
| Tpr2g2731 | 376 | Gene3D | Classic Zinc Finger | 163 | 195 | - | - | |
| Tpr2g2731 | 376 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 77 | 106 | IPR013087 | - | |
| Tpr2g2731 | 376 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 136 | 165 | IPR013087 | - | |
| Tpr2g2731 | 376 | MobiDBLite | consensus disorder prediction | 198 | 226 | - | - | |
| Tpr2g2731 | 376 | SUPERFAMILY | beta-beta-alpha zinc fingers | 227 | 255 | IPR036236 | - | |
| Tpr2g2731 | 376 | Gene3D | Classic Zinc Finger | 205 | 270 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Tpr2g2731 | Tpr-Chr2 | 31953528 | 31957433 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Tpr2g2731 | 10 | 362 | C2H2 Transcription Factor Family | AT4G06634 | 66.216 | 1.64e-147 | 421 |
Transcription factors information
| Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
|---|---|---|---|---|---|---|---|
| TF | C2H2 | Tpr2g2731 | zf-C2H2 | 0.009 | CL0361 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tpr2g2731 | - | - | zju:107412546 | 615.15 |