Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g2729 ATGGTACTATTGAATGCAGATGGATATGATCCGTTGGATCCTTTTGGTAACATCACCATCACATGGGATTTCTTGTCCGATAACGAAGACACTATCGATGTGAAGGTATCAATACACAATTTCCAACTATTTCGCCACGTGGAAGAACCTGGTTGGAAATTGGGTTGGACATGGAGAGGTCATGAAGTGATTTTGGCAATGTTTGGAGCAGAGGCAATGGAACAAGGAAATTGCACATTATTTAGAGGACAAGATAAACCTCATTGTTGTAAGAAAGAGCCAGTTATTATTGATCTCATGCCTGGTGCACCATACAACATGCAATCTGCCAATTGTTGTAAAGGAGGGGTCTTAACATCATTGACACAAGATGTTACCAAACATGTTGCATCCTTTCAGATGAATTATATGAAATCATCAACCTCAATTTCAGGTAGTAATTTTAGTATGCCTGAGAATTTTACACTAGGTCTTCCTGGTTATAGCTGTGCCAAACCATTTGAAGTTCCACCAACCAAATTTACCAAAAATGGACATAGGTGGCTGCAAGTCCTAGAAACTTGGAACGTGACATGTACTTACTCACCGTTTTTAACATCATATACCCCAAAATGTTGTGTCTCCTTCTCTGCATTCTACCATAGCGACATTGTTCCTTGCCCTTTATGCAGCTGTAATTGCCAAGGACAACCAAGAGCAGATTGCATAGATTCTTATAAGACTTCAGTGTTGAAACTTCCACAAGCAAATGATGCAGAACCAGTTGTGAGGTGTTCACATCACATGTGTCCTATACGCGTTCATTGGCATGTAAAACAAAGTTATAGAGAGTATTGGAGGGTCAAGATCACAATCACAAATCTAAACATCATAAAAAACTATTCTCAATGGAATTTGGTTGTTTTACATCCCAATTTGCGAAATTTAACACAAGTTTTTAGTTTCAACTACCAACCTTTGCCAACTTATGGAAATTTCAATGATACAGGGATATTTTGGGGCCTAAAATACTACAATGACTTGCTGCTAGCACATGGAGAGGATGGGAATGTGCAAACAGAGTTGTTACTAAACAAAGATCAAGGAGAGTTCACCTTTAAAGAAGGATGGACTTTTCCGAGAAAGATTTCGTTTAATGGAGATGAATGTGTTATGCCATCTCCTGACCATTATCCAAGGCTTCCCAATTCATCTCATATTGCTACCAAAAGCCCTCTCATGTGTTTGTTCTTGATGTTACTATTAACAATATTGTTCTTATAA 1263 0.3832 MVLLNADGYDPLDPFGNITITWDFLSDNEDTIDVKVSIHNFQLFRHVEEPGWKLGWTWRGHEVILAMFGAEAMEQGNCTLFRGQDKPHCCKKEPVIIDLMPGAPYNMQSANCCKGGVLTSLTQDVTKHVASFQMNYMKSSTSISGSNFSMPENFTLGLPGYSCAKPFEVPPTKFTKNGHRWLQVLETWNVTCTYSPFLTSYTPKCCVSFSAFYHSDIVPCPLCSCNCQGQPRADCIDSYKTSVLKLPQANDAEPVVRCSHHMCPIRVHWHVKQSYREYWRVKITITNLNIIKNYSQWNLVVLHPNLRNLTQVFSFNYQPLPTYGNFNDTGIFWGLKYYNDLLLAHGEDGNVQTELLLNKDQGEFTFKEGWTFPRKISFNGDECVMPSPDHYPRLPNSSHIATKSPLMCLFLMLLLTILFL* 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g2729 420 PANTHER COBRA-LIKE PROTEIN 6 5 415 - -
Tpr2g2729 420 PANTHER PROTEIN COBRA 5 415 IPR006918 GO:0010215|GO:0031225
Tpr2g2729 420 Pfam COBRA-like protein 34 195 IPR006918 GO:0010215|GO:0031225
Tpr2g2729 420 PIRSF COBRA 1 420 IPR006918 GO:0010215|GO:0031225
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g2729 Tpr-Chr2 31940782 31943199 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g2729 7 420 COBRA Gene Family AT3G29810 52.632 7.25e-163 464
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g2729 - - lang:109329241 652.514