Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g2693 ATGAAAAGGAATCCCTTTCTTATTGTGGCTTCAAACCAAAGCCATCCCTTTCACCCTTTTTCTCCTTCCTCAAAACCCACATATAAAATCCTTTCTCCAACTTTTTTCTTCCTTCTTCCTCAACAACACACTCCACCTTGTATATCACCATTTCATTTCATCCATAATATGTCTCTCACAGGCCGGCCTCGTGTTGTAGTCAATGGTGTTCGAAGAATGAGAACCTTCCATTATTTCTGGTGTCTCAATTGCCAACGTACTGTCAGAATACCCTCAACAAATACTATAACACATGGCTCTTTTTGCCCATATTGCTTCCATCAATTGCGTTATGAACTTGATATCTCACGGCCAAGGCTTCTCATGAATGTGACTAACAATAACATGGAGTCTCCTCCTTCTACTAATCAATTAATGGGTAACTTAGCTTTCATTCTTGATCCATCTCTCAGGAGACAAGATCAAAACAACATAACACCACAATGGGAAACAGAACATGAAGATGATCAAAACCAAAATCAAAATCCACAAGCATGGATTACACTCCGATTTGTAAGACCAACTCGTCCACCAAGGCCTATTGCACCACCGCCACAACCACAAAACTTGGCACCCCAACCCAATGACAATGACGCTCCTTCGTTAGACGAGTTCTTTGATGGGATGATTCACAACAACAGCAGACCAGGGCCACCTCCCGCATCACCTTCCGCCATTGAAGCCTTGCCAATGGTGAAAGTGACAGAATCCCATTTGACAAGTGACCCGAATTGTCCAATATGCAAAGATGAGTTTGAGGTTGATGTGGAAGTGAGAGAGTTACCATGCAAACATTTCTACCATTCTGACTGCATTCTACCTTGGCTTCGCATGCACAACACTTGCCCCGTATGCCGCCATGAGATACAAGGGATTGATAATAGTAATGCTAGTTACTACTTTTCCCATAATGAGAATGAGCAACATGGGTTCATTGGGTTTGAGGAATTTACAAGCAGCATTAAATGGATCTGGAGCCAACTTGCTTTGTTTAGACCTATTCGTGCAGTTCTAGATTGGACGCGGTCCTATTTTGAATTCCATGCCCGTGCTCATAGTAGAAGTAGCTCTTGGTGGCGGGCATTGCTCATTTCGTAG 1137 0.4292 MKRNPFLIVASNQSHPFHPFSPSSKPTYKILSPTFFFLLPQQHTPPCISPFHFIHNMSLTGRPRVVVNGVRRMRTFHYFWCLNCQRTVRIPSTNTITHGSFCPYCFHQLRYELDISRPRLLMNVTNNNMESPPSTNQLMGNLAFILDPSLRRQDQNNITPQWETEHEDDQNQNQNPQAWITLRFVRPTRPPRPIAPPPQPQNLAPQPNDNDAPSLDEFFDGMIHNNSRPGPPPASPSAIEALPMVKVTESHLTSDPNCPICKDEFEVDVEVRELPCKHFYHSDCILPWLRMHNTCPVCRHEIQGIDNSNASYYFSHNENEQHGFIGFEEFTSSIKWIWSQLALFRPIRAVLDWTRSYFEFHARAHSRSSSWWRALLIS* 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g2693 378 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 221 304 IPR013083 -
Tpr2g2693 378 SUPERFAMILY RING/U-box 238 304 - -
Tpr2g2693 378 ProSiteProfiles Zinc finger RING-type profile. 258 299 IPR001841 -
Tpr2g2693 378 PANTHER ZINC FINGER, C3HC4 TYPE (RING FINGER) PROTEIN 77 355 - -
Tpr2g2693 378 SMART ring_2 258 298 IPR001841 -
Tpr2g2693 378 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 77 355 - -
Tpr2g2693 378 CDD RING-H2_RNF126_like 258 299 - -
Tpr2g2693 378 Pfam Ring finger domain 257 299 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g2693 Tpr-Chr2 31680013 31681922 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g2693 57 360 C3H Transcription Factor Family AT1G68180 31.922 6.21e-42 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g2693 K11982 - gmx:100793656 346.28