Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g2667 ATGGAGAAGCAGAACAAGATGAATATTAAGCTTGAGAAATTAAACACAATACTCATAAAACCCTCAAAACCAACACCATTACATCTTCAAACTTTCAAACTCTCATTACTAGATCAATTTTCTCCTAATTATCATACCAACAAGACTTTCTTCTACCCAAATCACAACAACAATAACAATACCAACAATCATTTTTCTGATTTTTCCAATAAATCAAAAATTCTTCAAAACTCACTTTCTCAAACATTATCCCATTTTTACCCTCTCGCCGGCCGTCTCCATGACGCCACCACCATTCACTGTAACGACGACGGCGTTTTCTTCATCGAATCACGATCAACCACCACTCTCTCCCAAATTCTCACCAATCCTAATTTCGATGCACTAGAATGCTTCGTCCCAACCACTGAGGAAAAACGAAACATGCTGTTATTACTCCGATTCACCTTGTTCAGATGCGGTTCCACCGCAATTACCACATTTGTCACACACAAGATCGTTGAACTTAACACACTCATAATTTTTCTCAACACTTGGGCTGCCATCACCACCGGAAATGAAATTCCACTCCCTGATTTAACAGTCGCCGCCGCTCTTTTTCCTCCGAGAGAAGTTCCCGACGTGTCTGGTTCCGTTAAAAATTCCAATGCAAAATTCACTACTAGAAGATTCATTTTCAAAGCATCCAAAATAGAAGAACTAAAGATAAAAATCAAAAACAAATTTGAATTTCATCCTTCTAGGGTAGAGGTTGTTTTAGCTCTGATTTGGAAATGTGCTCTTTCGGCATCAATAGTAGTTTCTGGTTCCAAAACGACGTCGTTTAGGCGTTCGATGTTGTTCCAAGCAATAAACATCCGTACACGGATGAACCCCGCCGTACCAGAAACTGCAGTTGGGAACTTGGCTTGGCCGTTTTGGGTGACGGTTGAAGAAGAAAGCCATGTGGCAATAGATGAGATGGTGAAAAGAATGAGGAAGGGTAAAATGGACTTTATAGAGAATAAAGCAGAGAGGTTTAAAGAGGAAGGTGGGTTTAAGGTTGTGATGGAGAATTTGAAAGAGAGGGTTGAGATTTTGAAAAGGAATAATGAGAATAAGGGTAGTTTGGTAGTTTACAACAGTTCAAGTTGGTGTAATTATCCATTGCTTGAGTTTGATTTTGGGTGGGGCAAACCTGTGTGGTGTAGTAGTGTGAATAATAATTTTGCGATTAATTTAATTATTTTGATGGATACAAAAAATGGTGGTGGAATTGAAGCTTTCGTTACTCTTGTTGAAGATGAGATGAAATTGTTTGAACAAAATCAGGAGCTGCTACACTATGCTGTGCTTAATCCTACAATTCTTATTTCAACTTCAAAGTTCTAA 1371 0.3858 MEKQNKMNIKLEKLNTILIKPSKPTPLHLQTFKLSLLDQFSPNYHTNKTFFYPNHNNNNNTNNHFSDFSNKSKILQNSLSQTLSHFYPLAGRLHDATTIHCNDDGVFFIESRSTTTLSQILTNPNFDALECFVPTTEEKRNMLLLLRFTLFRCGSTAITTFVTHKIVELNTLIIFLNTWAAITTGNEIPLPDLTVAAALFPPREVPDVSGSVKNSNAKFTTRRFIFKASKIEELKIKIKNKFEFHPSRVEVVLALIWKCALSASIVVSGSKTTSFRRSMLFQAINIRTRMNPAVPETAVGNLAWPFWVTVEEESHVAIDEMVKRMRKGKMDFIENKAERFKEEGGFKVVMENLKERVEILKRNNENKGSLVVYNSSSWCNYPLLEFDFGWGKPVWCSSVNNNFAINLIILMDTKNGGGIEAFVTLVEDEMKLFEQNQELLHYAVLNPTILISTSKF* 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g2667 456 Gene3D - 217 443 IPR023213 -
Tpr2g2667 456 Pfam Transferase family 10 439 - -
Tpr2g2667 456 Coils Coil 350 370 - -
Tpr2g2667 456 Gene3D - 7 209 IPR023213 -
Tpr2g2667 456 PANTHER F21J9.9 8 450 - -
Tpr2g2667 456 PANTHER VINORINE SYNTHASE-RELATED 8 450 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g2667 Tpr-Chr2 31480555 31482213 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g2667 6 435 Monolignol Biosynthesis Gene Families AT5G48930 22.009 3.61e-25 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g2667 - - mtr:MTR_2g007880 615.92