Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g2666 ATGGAGAATAGTAGTAATAACAAGTACTACGAGATTAAGCTTGAAAAATTAAACACAATACTCATAAAACCATCAAAACCCACACCATCGCATCTTCAAAATTTCAAACTCTCATTACTAGATCAACTTTCTCCTAATATTCATGGCAACACCACTTTCTTCTACCCAAATCACAACAACAATAACAATAACCACAACCATTTTTCTGATTTTATTAATAAATCAAAAATTCTTCAAAACTCACTTTCTCAAACATTATCCCATTTTTACCCTCTCGCCGGCCGTCTACATGATGCCACCACCATTCACTGTAACGACGACGGTGTTTTCTTCATCGAATCACAAACAACCACCACTCTCTCCGAAATTCTCACCGATCCTAATTTCAATACACTAGAATGCTTCCTCCCAACCACTGAGGAGAAACGAAACATGTTGTTATTACTCCGATTCACGTTATTCAGTTGCGGTTCCACTGCAATTACCATATCCCTCACACACAAGATCGTTGACTTTAATACACTCATAATTTTTCTCAACACTTGGACCACGATCACCACTGGAAATGAAATTCCACTCCCTGATTTAACTGTAGCCGCCGCTCTTTTTCCTCCGAGAGAAATTCCCGGTATGTCTGGTTCCGTTAAAACTTCCGATGCAAAATTCACTACTAGAAGATTCATTTTCGAAGCATCCAAAATAGAAGAACTAAAGACAAATATCAAAAACAAAATCGAATTTGAATTTGAATTTCATCCTTCTAGGGTAGAGGTTGTTTTAGCTCTGATTTGGAAATGTGCTCTTTCGGCATCAATAGCAGTTTCTGGTTCCAAAACGACGTCGTTTAAGCGTTCGATTTTGTTCCAAGCAGTGAACCTCCGTACACGGATGGAACCCACCGTACCAGAAACTGCAGTTGGAAATGTGGTTTGGCCGTTTTGGGTGACGGTTGAAGAAGAAAGCCACGTGGCAATAGATGAGATGGTGAAAAGAATGAGGAAGGGTATAATGGACTTTATAGAGAATAAAGCAGAGAGGTTTAAAGAGGAAGGTGGGTTTAAAGTTGTGATGGAGAGTTTGAAAGAGAGAGTAGAGATTTTGAAGGGAAATGAGAATGAGGGTAGTTTGGTAATTTACAAATGTTCAAGTTGGTGTAAATTTCCATTGCTTGAATTTGATTTCGGTTGGGGAAAACCTGTGTGGAGTTGTAGTGTGAATAATTTGGTGAGTAATACAATTGCTTTGATGGATACAAAAGATGGTGGTGGAGTTGAAGCTTTTGTTACTCTTGATGAAGATGAGATGAAATTGTTTGAACAAAATCAGGAGCTGCTACACTATGCTTTGCTTAATCCTACAATTCTTATTTGA 1371 0.3829 MENSSNNKYYEIKLEKLNTILIKPSKPTPSHLQNFKLSLLDQLSPNIHGNTTFFYPNHNNNNNNHNHFSDFINKSKILQNSLSQTLSHFYPLAGRLHDATTIHCNDDGVFFIESQTTTTLSEILTDPNFNTLECFLPTTEEKRNMLLLLRFTLFSCGSTAITISLTHKIVDFNTLIIFLNTWTTITTGNEIPLPDLTVAAALFPPREIPGMSGSVKTSDAKFTTRRFIFEASKIEELKTNIKNKIEFEFEFHPSRVEVVLALIWKCALSASIAVSGSKTTSFKRSILFQAVNLRTRMEPTVPETAVGNVVWPFWVTVEEESHVAIDEMVKRMRKGIMDFIENKAERFKEEGGFKVVMESLKERVEILKGNENEGSLVIYKCSSWCKFPLLEFDFGWGKPVWSCSVNNLVSNTIALMDTKDGGGVEAFVTLDEDEMKLFEQNQELLHYALLNPTILI* 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g2666 456 Pfam Transferase family 13 444 - -
Tpr2g2666 456 Gene3D - 219 448 IPR023213 -
Tpr2g2666 456 Gene3D - 11 210 IPR023213 -
Tpr2g2666 456 PANTHER F21J9.9 11 455 - -
Tpr2g2666 456 PANTHER VINORINE SYNTHASE-RELATED 11 455 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g2666 Tpr-Chr2 31473876 31475492 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g2666 12 440 Monolignol Biosynthesis Gene Families AT5G48930 22.993 5.61e-27 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g2666 - - mtr:MTR_2g007880 706.442