Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g2659 ATGATGAAGGAGAATTTATGCAATGTAGTACAAGGTTTGAAGCCAACGTTGTTAATGGTTATGGTGCAAATAGCATTTGCTGGTGTTAATATTCTCTACAAACTTGCTGTTAATGATGGCATGAATTTAAGGATTGTTGTTGCTTACCGTTTTATATTTGCAACTGCTTTCATTGCTCCACTTGCTTTCTTTCTTGAAAGGAAGAAGAGGACAAAGATGACTTGGATGGTAATGTTCCAGTCTTTTCTCTGTGGTTTGTTTGGAGGATCATTATGTCAAAACTTCTACTTAGAAGCCCTGTCTTTAACCTCAGCAACATTTGCAACCGCAATGGCCAACCTTATACCAGCATTAACCTTTATCATGGCCGTTTCCTTAAGGATGGAGAAATTAAATTTGAGAACAAAAGCAGGGAAGGCAAAGATAATAGGTACAATGAGTGGAATTTGTGGGGCAATGGTATTGACATTTGTTAAAGGTATTGAAATCAAGATAGGTTCATTTCACTTAAACCTTTTGCATCACCAAAACGGTGTCGGATTGCACCCACATGCTACTACTATATCCAAAGGTAATACACTTTTGGGCTCTCTGTGTGCCTTGGCTAGTTCCATCTCTTATTCATCCTGGCTTATTATTAATGCAAAGATGAGTGAAAAGTATCCAACTCATTACTCAAGCACAGCATTGATGACATTTTGGTCATCACTAATTTCCATTGTGTTTGCTCTATGCTTTGAAAGGGATTTTAGTGCATGGAGGTTAGGTTGGAATATTAGGCTACTAACTGTTGCTTATGCGGGTATAGTGGTTTCAGGAGCAATGATAGTTGTAACTTCATGGGTTGTACACCTGAGAGGTCCATTATTTGCCTCTGTTTTTAACCCTCTAATGCTTGTCATTGTGGCCTTTGCTAGTTGTACCATGTTGAATGAGAAACTATATCTTGGAACCATTATTGGAGCAGTTTTGATTGTATGTGGCTTGTATACGGTTGTATGGGGTAAGAGTAAAGAGAAGAAGAAAAATAATCAATTAGTGCCATCACAAAGCTCCAATGAATTTAACACAGTTGAAATAGTTGTGAGGCATGTAGTAGAGGATAAAAGCAACCATAATAATAGCAATGATGAAACTCAAGGTAATAATACTTTACAAGTACATGAACATGAACATGAACATAAACATGAAGAGCAAAATCATGAACATGTACAAGATCAACAAAAAGGAGACGAAATTGGCCATCATGACTAA 1254 0.3716 MMKENLCNVVQGLKPTLLMVMVQIAFAGVNILYKLAVNDGMNLRIVVAYRFIFATAFIAPLAFFLERKKRTKMTWMVMFQSFLCGLFGGSLCQNFYLEALSLTSATFATAMANLIPALTFIMAVSLRMEKLNLRTKAGKAKIIGTMSGICGAMVLTFVKGIEIKIGSFHLNLLHHQNGVGLHPHATTISKGNTLLGSLCALASSISYSSWLIINAKMSEKYPTHYSSTALMTFWSSLISIVFALCFERDFSAWRLGWNIRLLTVAYAGIVVSGAMIVVTSWVVHLRGPLFASVFNPLMLVIVAFASCTMLNEKLYLGTIIGAVLIVCGLYTVVWGKSKEKKKNNQLVPSQSSNEFNTVEIVVRHVVEDKSNHNNSNDETQGNNTLQVHEHEHEHKHEEQNHEHVQDQQKGDEIGHHD* 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g2659 417 SUPERFAMILY Multidrug resistance efflux transporter EmrE 236 339 - -
Tpr2g2659 417 Coils Coil 387 407 - -
Tpr2g2659 417 PANTHER WAT1-RELATED PROTEIN 14 371 - -
Tpr2g2659 417 MobiDBLite consensus disorder prediction 387 417 - -
Tpr2g2659 417 SUPERFAMILY Multidrug resistance efflux transporter EmrE 49 144 - -
Tpr2g2659 417 Pfam EamA-like transporter family 195 333 IPR000620 GO:0016020|GO:0016021
Tpr2g2659 417 Pfam EamA-like transporter family 15 155 IPR000620 GO:0016020|GO:0016021
Tpr2g2659 417 PANTHER WAT1-RELATED PROTEIN 14 371 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g2659 Tpr-Chr2 31413802 31417695 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g2659 13 356 Nodulin-like Gene Family AT1G25270 42.442 1.50e-92 281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g2659 - - gmx:100787839 538.88