Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g2653 ATGGCTGAAATTCAACACCACCATGCAGCTACACTAGCTCGCAGTGAATCAAAAGTGTACAACATGGATGTTGAAAAAAATGAAGAAAAAGATTATACACAAAGAGCTCAATGGCTTAGAGCAGCTGTTTTAGGTGCTAATGATGGTTTACTCTCAACAGCATCCTTAATGATGGGTGTTGGAGCTGTTACAAAAGATGTTAAGACAATGATTCTAACCGGAATTGCTGGTCTTATAGCCGGTGCATGTAGCATGGCAATCGGTGAATTTGTGTCGGTATATTCGCAATATGATATTGAGTATGCACAAATGAAAAGACAAGGAAATACTTCTCAGAAAGATAAATTACCTAATCCTTATTATGCCGCTTTTGCCTCGGCCGTTGCTTTTGCGGTCGGGGCTTTTGTGCCGTTACTCGGCGCGGCTTTTGTGAAAGATTATAAGGTTAGATTGGGAGTTGTGGTTGGTGTTGTTAGTTTTGCCTTGTTTGTTTTTGGTGGGTTGAGTGGTTTTCTTGGGAAAGCACCTTTGGTTAAGTCATGTTTGAGGGTTTTGATTGGTGGATGGTTAGCTATGTCTCTTACTTTTGGTTTAACTAAGCTTGTAAACCATGTTGTAGTTTGA 624 0.4022 MAEIQHHHAATLARSESKVYNMDVEKNEEKDYTQRAQWLRAAVLGANDGLLSTASLMMGVGAVTKDVKTMILTGIAGLIAGACSMAIGEFVSVYSQYDIEYAQMKRQGNTSQKDKLPNPYYAAFASAVAFAVGAFVPLLGAAFVKDYKVRLGVVVGVVSFALFVFGGLSGFLGKAPLVKSCLRVLIGGWLAMSLTFGLTKLVNHVVV* 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g2653 207 Pfam VIT family 39 112 IPR008217 GO:0005384|GO:0030026
Tpr2g2653 207 Pfam VIT family 106 199 IPR008217 GO:0005384|GO:0030026
Tpr2g2653 207 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 1 204 IPR008217 GO:0005384|GO:0030026
Tpr2g2653 207 PANTHER VACUOLAR IRON TRANSPORTER HOMOLOG 1-RELATED 1 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g2653 Tpr-Chr2 31340198 31340889 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g2653 14 202 Nodulin-like Gene Family AT3G43660 68.229 8.63e-93 268
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g2653 K22736 - gmx:100811713 273.478