Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g2652 ATGGTTGGAAGTGTTGATGTTTTGGGCGATGATTTGAGCATTAACGGAGCAGTTGAAGTATTGCCTGATGATTTTGATGTGGCTGCCATTATCAAAGATCCTTTGCCTCCTGTAGTTGCAGAAAATGGCACTGACAAGGTGGAGGTTCAGATCAATGCGGGAAAAGAGAGAAGGGAAATAGTACTGGGGAGAAATATTCATACCACTTGTCTAGAAGTCACGGAGCCAGAAGCAGATGATGAGATTACTGGGGATCGTGATGCTCATATGGCAAGTGTGTTGGCCAGATACAGAAGATCTTTAACTGAAAGGACAAAGTATCATTTAGGCTACCCCTATAATTTAGATTTCGATTATGGTGCACTCTCTCAACTTCAGCACTTTTCCATAAACAACCTTGGAGATCCATTTATTGAAAGCAATTATGGTGTCCACTCCCGGCAGTTTGAAGTTGGTGTTTTGGATTGGTTTGCCAGATTGTGGGAATTGGAGAAAAATGAGTACTGGGGCTATATAACAAACTGTGGCACAGAAGGCAATCTCCATGGCATCCTAGTTGGGAGAGAGGTGTTACCAGATGGGATTTTGTATGCCTCACGGGAGTCACATTATTCAATTTTTAAAGCTGCCCGTATGTACAGAATGGAATGTGTGAAGGTTGAGACTCTTTGGTCTGGCGAGATTGATTGTGATGATTTCAAGGCTAAACTTCTTCTCCACCAGGACAAGCCAGCAATTATAAATGTGAACATAGGTACAACTGTGAAAGGAGCTGTGGATGATCTTGATCTGGTCATAAAGAAACTTGAAGAAGCTGGATTTTCGCATGATAGGTTCTACATCCATGTTGATGGGGCTTTGTTTGGTCTCATGATGCCTTTCGTGAAAATAGCTCCAAAAGTTACTTTTAAGAAACCTATTGGCAGTGTCAGTGTTTCTGGCCACAAATTTGTGGGGTGCCCCATGCCTTGTGGTGTGCAGATAACAAGATTGGAGCATATTAATGCTCTTTCCAGGAATGTGGAATACCTTGCTTCTAGGGATGCCACAATCATGGGTAGTCGAAATGGCCATGCTCCCATATTCCTTTGGTATACCTTGAACCGTAAAGGATACAGAGGCTTTCAGAAAGAAGTACAGAGATGCTTGCGAAATGCTCACTACTTTAAAGACCGCCTTATTGAGTCTGGGATTGGTGCAATGCTTAATGAGCTTAGCAGCACGGTTGTATTTGAGCGGCCACATGATGAGGAATTTATACGCAAGTGGCAGCTAGCATGCAAGGGGAACATCGCTCATGTGGTGGTGATGCCAAACGTCACTATTGAGAAGCTTGATGATTTTCTAAACGAGCTTGTGCAGAAGCGTGCTACCTGGTTTAAAGATGAGAAGTGTCAACCATATTGTATAGCATCAGATGTAGGCGAAAACAGTTGCCTCTGTGCACTGCATAAGTAA 1458 0.4307 MVGSVDVLGDDLSINGAVEVLPDDFDVAAIIKDPLPPVVAENGTDKVEVQINAGKERREIVLGRNIHTTCLEVTEPEADDEITGDRDAHMASVLARYRRSLTERTKYHLGYPYNLDFDYGALSQLQHFSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWELEKNEYWGYITNCGTEGNLHGILVGREVLPDGILYASRESHYSIFKAARMYRMECVKVETLWSGEIDCDDFKAKLLLHQDKPAIINVNIGTTVKGAVDDLDLVIKKLEEAGFSHDRFYIHVDGALFGLMMPFVKIAPKVTFKKPIGSVSVSGHKFVGCPMPCGVQITRLEHINALSRNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYRGFQKEVQRCLRNAHYFKDRLIESGIGAMLNELSSTVVFERPHDEEFIRKWQLACKGNIAHVVVMPNVTIEKLDDFLNELVQKRATWFKDEKCQPYCIASDVGENSCLCALHK* 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g2652 485 Gene3D - 123 367 IPR015421 GO:0003824
Tpr2g2652 485 Pfam Pyridoxal-dependent decarboxylase conserved domain 195 404 IPR002129 GO:0016830|GO:0019752|GO:0030170
Tpr2g2652 485 PANTHER SERINE DECARBOXYLASE 1 485 - -
Tpr2g2652 485 PANTHER - 1 485 - -
Tpr2g2652 485 SUPERFAMILY PLP-dependent transferases 104 456 IPR015424 -
Tpr2g2652 485 ProSitePatterns DDC / GAD / HDC / TyrDC pyridoxal-phosphate attachment site. 309 330 IPR021115 GO:0016831
Tpr2g2652 485 Gene3D Aspartate Aminotransferase, domain 1 368 456 IPR015422 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g2652 Tpr-Chr2 31329522 31334882 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g2652 208 391 Calmodulin-binding Proteins AT1G65960 27.461 1.38e-09 57.8