Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g2644 ATGGGAGATAAGAATGATATTTACAATGTCAACCTTCCACCTGGGTTTCGTTTTGATCCCACAGATGAAGAGCTTGTAGTTCATTTCCTTCAAAGAAAAGCAACACTCTTACCTTGCCATCCTCATGTCATCCCTGATCTTCACCTATACTCATATGATCCATGGCAACTTCATGATAGAGCTTTGTTGGAGGGAAACAAATGGTACTACTACAGCAGAAGGACACAAAATAGAGTCACTGATAATGGTTATTGGAAGGCAACAGGAATGGAAGAGGCAGTGATTTGTAGTACAAACAATAAGAAAGTTGGCATGAAGAAACATTTTGTGTTCCATGTTGGAGAATCCCCTGCTTCAGGTATCAAAACCAATTGGATAATGCAAGAATTTTGTCTATCAGACTCTGCTTCCTCCTCTGCTAAATCATCTAAAAGAAAATCACAACCAATCAAAGATTATAGTAAATGGGTGATATGTCGAGTATATGAGCAAAATGAAGATGGTGATGATGGAATGGATCAGCTCTCTTATTTAGATGAAGTTTTCTTGTCATTAGATGATCTTGACGAAATAAGCTTACCAAATTATTAA 591 0.3723 MGDKNDIYNVNLPPGFRFDPTDEELVVHFLQRKATLLPCHPHVIPDLHLYSYDPWQLHDRALLEGNKWYYYSRRTQNRVTDNGYWKATGMEEAVICSTNNKKVGMKKHFVFHVGESPASGIKTNWIMQEFCLSDSASSSAKSSKRKSQPIKDYSKWVICRVYEQNEDGDDGMDQLSYLDEVFLSLDDLDEISLPNY* 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g2644 196 PANTHER NAC TRANSCRIPTION FACTOR 56 9 192 - -
Tpr2g2644 196 Gene3D NAC domain 21 169 IPR036093 GO:0003677|GO:0006355
Tpr2g2644 196 ProSiteProfiles NAC domain profile. 12 164 IPR003441 GO:0003677|GO:0006355
Tpr2g2644 196 PANTHER NAC DOMAIN-CONTAINING PROTEIN 104 9 192 - -
Tpr2g2644 196 Pfam No apical meristem (NAM) protein 13 132 IPR003441 GO:0003677|GO:0006355
Tpr2g2644 196 SUPERFAMILY NAC domain 9 164 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g2644 Tpr-Chr2 31261448 31263134 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g2644 11 183 NAC Transcription Factor Family AT1G69490 39.227 5.73e-42 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Tpr2g2644 NAM 9.5e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g2644 - - cam:101504837 298.901
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g1604 3 14274868 14276278 Tpr2g2644 2 31261448 31263134 PCT