Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g2629 ATGCATTCTCAACATAAAAACATAGACAAAAACATAACCAAAATGGATGTTTTATTATCCTTAAACTCACCAAACCTTATCAACATTTCAAAACCATATCAATATCATAATCTTCCAACACTCTCAAATAAACAACAAATTAGACAACCTCGTACTCAGTTTTCTATTTCATGCAGAGCCACAAACACAAAAAATGTTCCAATTCATGATGATGGAAATTTCTACGAGGTACTATGTTTGAGTCCAAAAAGTGCAACAATGGATGACATAAAAAGAGCATATAGAACAATGGCTCTTCAATATCATCCTGATTTGTGTCATGATCGTTTGAAGAACGAGGAATCAACGCGGATGTTTGTACAAGTGAATGCAGCTTATAAGACTCTGTCAAATCCAGAGCTAAAAGCAGAGTATGATTATGAAATTGGTTTGGGTTTGAGAAGAAGTAGGTGGATGGAACAAGTGATTGAGTTGAAAAGAAGGTCTCATAATGAAGGATCATGGGGTAGTAGAATGAGAGCCATGAACAATATCAACAAAGATGATCATTGA 552 0.346 MHSQHKNIDKNITKMDVLLSLNSPNLINISKPYQYHNLPTLSNKQQIRQPRTQFSISCRATNTKNVPIHDDGNFYEVLCLSPKSATMDDIKRAYRTMALQYHPDLCHDRLKNEESTRMFVQVNAAYKTLSNPELKAEYDYEIGLGLRRSRWMEQVIELKRRSHNEGSWGSRMRAMNNINKDDH* 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g2629 183 PANTHER CHAPERONE PROTEIN DNAJ 20 CHLOROPLASTIC 25 180 - -
Tpr2g2629 183 CDD DnaJ 73 131 IPR001623 -
Tpr2g2629 183 Gene3D DnaJ domain 60 163 IPR036869 -
Tpr2g2629 183 SMART dnaj_3 72 134 IPR001623 -
Tpr2g2629 183 SUPERFAMILY Chaperone J-domain 66 142 IPR036869 -
Tpr2g2629 183 Pfam DnaJ domain 73 139 IPR001623 -
Tpr2g2629 183 PRINTS DnaJ domain signature 76 94 IPR001623 -
Tpr2g2629 183 PRINTS DnaJ domain signature 94 109 IPR001623 -
Tpr2g2629 183 PRINTS DnaJ domain signature 114 134 IPR001623 -
Tpr2g2629 183 ProSiteProfiles dnaJ domain profile. 73 142 IPR001623 -
Tpr2g2629 183 PANTHER CHAPERONE DNAJ DOMAIN PROTEIN 25 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g2629 Tpr-Chr2 31152120 31152968 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g2629 75 139 C2H2 Transcription Factor Family AT1G74250 41.791 1.22e-07 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g2629 - - vun:114187063 175.252