LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Tpr2g2625	ATGGCAGCTGCAACATCTGGTGCTGTGTTGAATGGTTTAGGATCTTCCTTCTTAAGTGGTGGAAAGAGGAGCCAAACATTGCTAGCTACTGCTATTGGAAGTAAAGTTAGTGTTGCAGCTGCTAGTCCTAGAAGACTTATTGTTGCTGCTGCTGCTTCTGCACCAAAGAAGTCATGGATACCTGGTGTTAGATTTGGTGGAAATCTTGTCGATCCAGAATGGCTCGATGGATCGCTACCAGGTGACTTTGGTTTTGATCCACTAGGACTTGGCAAGGACCCAGCATTTCTCAAATGGTACAGAGAAGCTGAGCTCATTCATGGAAGGTGGGCAATGGCTGCAGTTCTAGGTATCTTTGTTGGTCAGGCATGGAGTGGAGTTCCCTGGTTTGAGGCCGGTGCTGACCCGAATGCAATTGCTCCATTCTCCTTTGGTACACTTCTAGGAACTCAATTGCTTCTTATGGGTTGGGTAGAGAGCAAGAGATGGGTTGATTTCTTCAACCCGGACTCACAGTCGGTTGAATGGGCAACTCCATGGTCAAAAACCGCCGAGAACTTTGCAAATTTTACTGGAGAACAAGGTTATCCAGGAGGGAAATTCTTCGATCCATTGTCCCTTGCTGGCACCATTGAAAATGGTGTTTACATTCCAGATGCAGAGAAGCTAGAGAGATTGAAATTGGCCGAGATTAAGCATGCTAGGCTTGCTATGTTGGCTATGCTGATTTTCTACTTTGAAGCTGGACAAGGGAAGACTCCACTTGGTGCTCTTGGTTTGTAA	783	0.4623	MAAATSGAVLNGLGSSFLSGGKRSQTLLATAIGSKVSVAAASPRRLIVAAAASAPKKSWIPGVRFGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQAWSGVPWFEAGADPNAIAPFSFGTLLGTQLLLMGWVESKRWVDFFNPDSQSVEWATPWSKTAENFANFTGEQGYPGGKFFDPLSLAGTIENGVYIPDAEKLERLKLAEIKHARLAMLAMLIFYFEAGQGKTPLGALGL*	261

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Tpr2g2625	260	Gene3D	Chlorophyll a/b binding protein domain	72	259	-	-
	Tpr2g2625	260	PANTHER	CHLOROPHYLL A/B BINDING PROTEIN	1	260	IPR001344	GO:0009765\|GO:0016020
	Tpr2g2625	260	Pfam	Chlorophyll A-B binding protein	72	248	IPR022796	-
	Tpr2g2625	260	SUPERFAMILY	Chlorophyll a-b binding protein	69	260	-	-
	Tpr2g2625	260	PANTHER	CHLOROPHYLL A-B BINDING PROTEIN CP24 10A, CHLOROPLASTIC	1	260	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Tpr2g2625	Tpr-Chr2	31114861	31116499	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Tpr2g2625	1	260	Chloroplast and Mitochondria Gene Families	AT1G15820	82.692	5.28e-155	430

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Tpr2g2625	K08917		-	gmx:100500118	469.929

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