Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g2618 ATGGTTTCAACCTCCAATATTGTGCTATTAGTTTCTCTGTTACTAACAATTCTTGTTGCATTGCAGTTCAATGAAGGTCAAAGTTTTACGCCTATTCCTGTCCCAGTAAAAGTATATGTTACCAACAACTTAACTGGCAATCTTCAGCTTGGTATTGAATGTAAAGACAAGCATCAGGATTTTGGATATCAAATCAAACATTTTAGAGAAAGTTACATCTTCACTGTTCATCCTACATTCCTATTTCCAACTAAATTATTCTGGTGTAGTTTTTCATGGATTAATGGAGCTAAATATTTTAACATTTATGATCAAAAACGAGATGAGGATGATTGCGACAAAGAATGTCGTTGGGAAATAAATGCATACGGACCATGTAAGTTGAAGGCTGGATCTATACAATGTTTTCAGTGGAATGCTAATATTGTTGAAGGAGATATGATAACTGGTGAAGGGAATAATAATCACAATGTGTAA 477 0.3375 MVSTSNIVLLVSLLLTILVALQFNEGQSFTPIPVPVKVYVTNNLTGNLQLGIECKDKHQDFGYQIKHFRESYIFTVHPTFLFPTKLFWCSFSWINGAKYFNIYDQKRDEDDCDKECRWEINAYGPCKLKAGSIQCFQWNANIVEGDMITGEGNNNHNV* 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g2618 158 PANTHER - 11 138 IPR010264 -
Tpr2g2618 158 Pfam Plant self-incompatibility protein S1 37 138 IPR010264 -
Tpr2g2618 158 PANTHER S-PROTEIN HOMOLOG 18-RELATED 11 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g2618 Tpr-Chr2 31066073 31066549 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g2618 17 140 Carbohydrate Esterase AT3G16970 30.435 2.02e-15 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g2618 - - mtr:MTR_2g008690 161.384