Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g2555 ATGCCCATGGTTGTGTACTCAAAACAGCTGCTGATGGTGGTTATTACAGTCTTTTTGGTAAAAGCAGCAACTCAGCAGCTACTATCTCTGCCAAACTGTCCAACAAAGTGTGGCTCTGTCACCATTCCCTTCCCATTTGGAATCACCAAGGATTGTTCCTTGGACAACACTTTTCTCATCAATTGCAACAAAACATCTTCAACTTCAACCTCCACACATGTACCTTCCTTGCCACAGAATAATCAAAGTGTATTAAACATCTCACTGGACGGTGAACTGCACGTTGCATGGCCAGTAGCCAGTGATTGCTATGCTGAAAAGAGCGAACCTGTGAACCAAACATATTGGGGTATCAACATGACGCATTTTCCCATCTCATCGACTCGAAACAAGTTAATTGCAGTTGGTTGTGACACGGTTGCATTCCTCGCAACATTTGATTCTGGGGGAAACAACTACAGCACAGGATGTGTGGCTTTGTGTAGCAGGCTTAGTGATATAATGGCCAATGAATCTTGCACCGGCACTGGTTGTTGTGAGATTTCAATACCCAAAGGTCATGTGTTCACAAAATTATCCTATTCTTCTGGTGGTTTATTCAACAATCACTCAGCTGTACATGACTTCAATCCATGTGGTTATGCTTTTTTGGTTGAAAATGGAGCCTACAGCTTCGAATCCACAGACCTTCTCAAGTTGGAGAAGGAGGAGTTTCCAGTGTTGTTGAACTGGGCAGTAGGGAACCTAACATGCCAGCAAGCTCAGAAGGATCTTTCAAATTATGCCTGTAAGGACAACACAAGTACATGTTACGATGCAACCGAGAGACCTGGTTACCTTTGCAGATGCTTTCATGGATATCAGGGAAATCCTTACCTCATTCATGGTTGCCAAGATATTAATGAATGCATTGAGTACAATGACTGTGTTGAGGGGGCAACGTGCATCAATCTTCCTGGAAGCTACCATTGTTTATGTCCAGCGGAATATGAGGGAAACGGGAAGATGAATGGAACAAGATGCAGTCCAAAATCGAACACCAAATCAAGGAAAGAGATCATATTGATCATTGCATTGAGTCTCAGCATAAGCCTCGTTGCACTACTGGTCGGAAGCTTTTATGCTTATTTGGTAATGAAGAAAAGGAAGCTCATTAAACTTAAAGAACAATTTTTTCAACAAAATGGTGGCTTACACTTGCAACAACAACTAGTGAGGCATGGAGGGTCAACTGAAACAGCTAGAGTCTTCACTGTTGAGGAGCTAAACAAAGCAACCAACAACTTCGACGAAAGAAAGATCCTAGGCCAAGGTGGTCAGGGAACAGTTTACAAAGGAGTTTTACAAGATAAAAGAATTGTAGCAATAAAGAAGTCCAAAATCAGTGACCCAAACCAAATTGAGCCGTTCATCAATGAAGTGATAGTGCTTTCCCAAATCAACCATAGAAATGTGGTAAAGCTCTTGGGTTGTTGTTTAGAAACAGAAGTTCCCTTGCTTGTTTATGAATTCATTCCCAATGGAACAGTTCATGATCATCTTCATGGTCAAAACCAAACTTTAAAGCTTACATGGAAAACAAGACTAAGAATAGCAAAAGAAACTGCTGGAGTCCTAGCATACTTGCATTCTACTGCTTCTACACCAATCATACATAGAGATGTGAAATCTACAAATATACTTCTAGATCGCAATCTCACCGCAAAGGTTTCTGACTTTGGAGCTTCTAGGATTGTTCCTCTTGATCACAGTCAGATAACCACTCTAGTGCAGGGAACATTGGGGTATCTTGACCCAGAATATTTCCACACAAGCCACTTAACAGAGAAGAGTGACGTCTATAGCTTTGGGGTTGTCCTCGCAGAGCTACTTACGGGAAAGCAGGCACTGTCTTTTAACAGGCCAGAGGAAGATAGAAACCTTGCAGTGTACTTTGTTTCTTCAATGAAAGAGGGTTGGTTACATCATATTTTGGACACAAATATAGATGAGGCGAATATTGAGCAACTAAAGGAAGTAGCCCATATTGCAGAAAGGTGTTTAAGGGTGAATAGTGACGAAAGACCTACCATGAAAGAAGTGGCAATGGAACTAGAGGGAATATTAGTGATTGAAGAGCACAGTTGGGGAAGTGGCAATTTATCTTCAGAAGAGACTGATAACTTGCTAAGAACAGTGCCGTCCATCAACGGTGAAGACGGAGTCTATGGAAGTGGCACTAATTGTTCTGACTCATATAGCACGAACCAGATGTCGATGTCAACGATTGGTGGAAGATGA 2280 0.418 MPMVVYSKQLLMVVITVFLVKAATQQLLSLPNCPTKCGSVTIPFPFGITKDCSLDNTFLINCNKTSSTSTSTHVPSLPQNNQSVLNISLDGELHVAWPVASDCYAEKSEPVNQTYWGINMTHFPISSTRNKLIAVGCDTVAFLATFDSGGNNYSTGCVALCSRLSDIMANESCTGTGCCEISIPKGHVFTKLSYSSGGLFNNHSAVHDFNPCGYAFLVENGAYSFESTDLLKLEKEEFPVLLNWAVGNLTCQQAQKDLSNYACKDNTSTCYDATERPGYLCRCFHGYQGNPYLIHGCQDINECIEYNDCVEGATCINLPGSYHCLCPAEYEGNGKMNGTRCSPKSNTKSRKEIILIIALSLSISLVALLVGSFYAYLVMKKRKLIKLKEQFFQQNGGLHLQQQLVRHGGSTETARVFTVEELNKATNNFDERKILGQGGQGTVYKGVLQDKRIVAIKKSKISDPNQIEPFINEVIVLSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTVHDHLHGQNQTLKLTWKTRLRIAKETAGVLAYLHSTASTPIIHRDVKSTNILLDRNLTAKVSDFGASRIVPLDHSQITTLVQGTLGYLDPEYFHTSHLTEKSDVYSFGVVLAELLTGKQALSFNRPEEDRNLAVYFVSSMKEGWLHHILDTNIDEANIEQLKEVAHIAERCLRVNSDERPTMKEVAMELEGILVIEEHSWGSGNLSSEETDNLLRTVPSINGEDGVYGSGTNCSDSYSTNQMSMSTIGGR* 760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g2555 759 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 14 737 IPR045274 GO:0007166
Tpr2g2555 759 Gene3D Phosphorylase Kinase; domain 1 405 504 - -
Tpr2g2555 759 SUPERFAMILY EGF/Laminin 298 334 - -
Tpr2g2555 759 CDD STKc_IRAK 435 701 - -
Tpr2g2555 759 SUPERFAMILY Protein kinase-like (PK-like) 412 698 IPR011009 -
Tpr2g2555 759 ProSiteProfiles Protein kinase domain profile. 429 710 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g2555 759 SMART egf_5 302 342 IPR000742 -
Tpr2g2555 759 SMART egf_5 250 298 IPR000742 -
Tpr2g2555 759 ProSiteProfiles EGF-like domain profile. 299 342 IPR000742 -
Tpr2g2555 759 SMART serkin_6 429 702 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g2555 759 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 315 326 IPR000152 -
Tpr2g2555 759 Gene3D Laminin 250 341 - -
Tpr2g2555 759 ProSitePatterns Calcium-binding EGF-like domain signature. 299 324 IPR018097 GO:0005509
Tpr2g2555 759 SMART egfca_6 299 342 IPR001881 GO:0005509
Tpr2g2555 759 Pfam Calcium-binding EGF domain 299 341 IPR001881 GO:0005509
Tpr2g2555 759 Pfam Protein kinase domain 430 694 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g2555 759 Pfam Wall-associated receptor kinase galacturonan-binding 33 91 IPR025287 GO:0030247
Tpr2g2555 759 ProSitePatterns Serine/Threonine protein kinases active-site signature. 550 562 IPR008271 GO:0004672|GO:0006468
Tpr2g2555 759 CDD EGF_CA 299 332 - -
Tpr2g2555 759 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 16-RELATED 14 737 - -
Tpr2g2555 759 Gene3D Transferase(Phosphotransferase) domain 1 505 713 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g2555 Tpr-Chr2 30411692 30414976 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g2555 12 709 Receptor kinase-like Gene Family AT1G21230 47.532 0.0 621
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Tpr2g2555 Pkinase 1.2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g2555 - - mtr:MTR_3g088780 1016.91