Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g2541 ATGGAAAATTATTCATATCAATCATATCCAGATTCAGGTAACTCATCACCACGTTCGAGAGAAATCGAGTTCGAAAACCCACCCACTGGAACAACAACAACAGCACCATGGGAAGATCAACAACAAAACCAAACAAGCAGCTACAAAGCAAAATTCATGTGCAGCTATGGTGGCAAAATCCAACCAAGAACACACGACAATCAACTCTCTTACGTTGGTGGTGAAACTAAAATCCTAGCCGTTGATCGTAACATCAAGTTTCCATTAATGATCTCAAAGCTCTGTTCTCTCATCGAAGCACCTGATGTTTCCTTTAAATACCAACTCCCTGGCGAAGATCTCGATGCACTTATCTCAGTAACTAACGACGATGATCTTGATCACATGATGCATGAATATGATCGTCTCTACCGTGCTTCCGCTAGACCCGCTCGTATGCGATTATTTCTTTTTGTTAACGAATCTGATTCTGTTTCAAATCCACCCGACCCGGTTAAACCGAATAACGTTGATTATTTATTCGGAATTGAAAAGCCTGTAACCGTTGTTGCTCCGCCACCTACTGCCGTTAAATTTCACGATCCTGTTCCAGAGCCGGTTGCTCCGTTACCTGAGTATCATAATCATAATCATGTTCGACCCGGTTTGAATCCTGATCGGGTTGTAGATTCGGATCCAGGTTTGAACCATCCGCTTGAGATTCAGAGGCAGTTACAACGGATGCAGATTGCGGAGAATGAACAAACTGGTTATCGGAGGAAAAGTGAAGATTATCCTGCCGGAGATTATTACGTTCAGAAAGTGCCGGAGAAATTTCCGGCGATGTCGAATTTCACACCACCACCGCCGCAGCATCAACAGCAACATCAGCAGCAGCATCAACCTGGTTATTGGCAAGAAAAACCTGTTTCCGGCGAGGTTTATCCACCGGGAGTGTCCGGAGGAGGTGATCCGGCGGTTTATATGGTTCCGGCACCGGGAACTTACTATCACGCGCCGGTGATGCGTCCACCGGCAACTCAAGGTTACTACACGGTGCAACGAATGCCGTCTGATGCTTACCGTGAAGCGCAGGTTTACGGTGGCGCTCCTCCGTCTAAAGCGCCGTTTTCGTCGGGAACTTCGGCGACTTATGCACCGGCGCAGCCGGTTAAAGGTCCTGTTTATGGTGAAGGAGTTAGTGTGGTTCGTTCGAGTGGGATACCGGATAATACGGTAAATTCATACGCACATGTGGCGTATGATAGTGCAAGTGGCAGACAAGTTTATTATAATGCTCCGGGTGGTGTAGTACACGCTCCTCCGTACCAAGGAGTTGCTGCACCTGTTACTACAGACGTTAAAGTGATGAGCAAGATTTCTCAAGGTTCAGTGTGA 1377 0.4677 MENYSYQSYPDSGNSSPRSREIEFENPPTGTTTTAPWEDQQQNQTSSYKAKFMCSYGGKIQPRTHDNQLSYVGGETKILAVDRNIKFPLMISKLCSLIEAPDVSFKYQLPGEDLDALISVTNDDDLDHMMHEYDRLYRASARPARMRLFLFVNESDSVSNPPDPVKPNNVDYLFGIEKPVTVVAPPPTAVKFHDPVPEPVAPLPEYHNHNHVRPGLNPDRVVDSDPGLNHPLEIQRQLQRMQIAENEQTGYRRKSEDYPAGDYYVQKVPEKFPAMSNFTPPPPQHQQQHQQQHQPGYWQEKPVSGEVYPPGVSGGGDPAVYMVPAPGTYYHAPVMRPPATQGYYTVQRMPSDAYREAQVYGGAPPSKAPFSSGTSATYAPAQPVKGPVYGEGVSVVRSSGIPDNTVNSYAHVAYDSASGRQVYYNAPGGVVHAPPYQGVAAPVTTDVKVMSKISQGSV* 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g2541 458 PANTHER OS05G0427100 PROTEIN-RELATED 1 451 - -
Tpr2g2541 458 Gene3D - 70 153 - -
Tpr2g2541 458 SMART PB1_new 64 153 IPR000270 GO:0005515
Tpr2g2541 458 MobiDBLite consensus disorder prediction 1 43 - -
Tpr2g2541 458 PANTHER OCTICOSAPEPTIDE/PHOX/BEM1P 1 451 - -
Tpr2g2541 458 SUPERFAMILY CAD & PB1 domains 65 161 - -
Tpr2g2541 458 CDD PB1_UP2 53 151 - -
Tpr2g2541 458 Pfam PB1 domain 65 152 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g2541 Tpr-Chr2 30236426 30238507 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g2541 48 151 MAP Kinase Kinase Kinase AT5G57610 49.038 9.39e-26 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g2541 - - gmx:100780332 551.592
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g1723 3 15275512 15276974 Tpr2g2541 2 30236426 30238507 PCT