Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g2536 ATGAATAAGGACTTATATGAAAAAGTTGTGGATGGTTGTGCATTGCTCCAAGATATCAACATATGGAGTGATGGAGATTTAACCATGGTGGAGGAGAGGGGAATAAATTTAAGTGGAGGACAAAAACAACGAATTCAGTTGGTAAGGGCTGTTTATAATGACTCAGATATTTATTTTCTCGGTGATCCTTTTAGTGCTGTTGATGCTCATAGGGGAAGCCATTTGTTTAAGAGGAATCAAGACTCATTTGATATTCCACCATCTGAGAATGATGTTCGAATTCATATGGCATTGATTCACGAGGCTACAGAAAGGGACACTGATTTAACAAAATCAAAGGTTCATAATTCTGTTTTTGTTTTGTACTTGGATTATCTGCTTAATTTCATAGGAAAGACATGTTCAAATGAAGACTTCCATGATGAGGAGGAGGTGGTGGTGGATGAGGAGAAGGAGGTGGAGGAGGAAGTGGAGGAGGAGGAGAAGGAGGAGGAGGAGGAGGAGGTGGAGGGGTTGGAGGCGAATGACAAATCTGACGGTGAAGGCGAACTCAATGTAGATGAAGAGCAAAATATTGGATACGATACTGTTTGTGCAATTTGTGATAATGGTGGTGAAATACTTCCTTGTGAAGGAAGGTGTCTGAGATCCTTCCATGCAACCATAGAGGCTGGCAGAGATTCATTTTGTGATTCTCTTGGCTACACAATTACTCAAGTTAATGTATTTCCTTGTGTTACTGCAAATTGTGGTCACTATTACCATCCTAAATGTGTTGCAAGACTACTCTACCCTGGCACTGACCCCAAACAAGAGGCAATGAGGAAGAACATTGCAACCGAAAAAACATTTGTCTGTCCTCTTCATATATGTTCGTTATGCAGAAAAGGTGAAAATAGAAACGTTCATGATTTGCAATTTGCGATGTGTAGACGCTGCCCCAAGGCTTACCACCGGAAATGCTTGCCCAAGGAAATTATTATATGGGCATTGAGCAGAGGGCTTGGGATGATCTTCTTGACAAAAGAATTTTGA 1035 0.4087 MNKDLYEKVVDGCALLQDINIWSDGDLTMVEERGINLSGGQKQRIQLVRAVYNDSDIYFLGDPFSAVDAHRGSHLFKRNQDSFDIPPSENDVRIHMALIHEATERDTDLTKSKVHNSVFVLYLDYLLNFIGKTCSNEDFHDEEEVVVDEEKEVEEEVEEEEKEEEEEEVEGLEANDKSDGEGELNVDEEQNIGYDTVCAICDNGGEILPCEGRCLRSFHATIEAGRDSFCDSLGYTITQVNVFPCVTANCGHYYHPKCVARLLYPGTDPKQEAMRKNIATEKTFVCPLHICSLCRKGENRNVHDLQFAMCRRCPKAYHRKCLPKEIIIWALSRGLGMIFLTKEF* 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g2536 344 Gene3D - 1 105 IPR027417 -
Tpr2g2536 344 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 194 225 IPR013083 -
Tpr2g2536 344 PANTHER PHD FINGER-CONTAINING PROTEIN DDB_G0268158 74 327 - -
Tpr2g2536 344 Coils Coil 140 177 - -
Tpr2g2536 344 MobiDBLite consensus disorder prediction 141 174 - -
Tpr2g2536 344 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 4 78 IPR027417 -
Tpr2g2536 344 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 226 312 IPR013083 -
Tpr2g2536 344 MobiDBLite consensus disorder prediction 141 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g2536 Tpr-Chr2 30205724 30209330 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g2536 19 69 Calmodulin-binding Proteins AT2G36910 47.059 1.70e-06 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g2536 - - cam:101512524 318.931