Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g2532 ATGCCCCAAGGTGTTGTTGATTGGAGGAGTTTACCGGATGATATACTAATTCAGCTATTGTCATGTCTGAGTTATCGAGACCGAGCTAGTTTATCAGCATGTTGTAAGAAATGGAGGGTTCTTGGTAACTCCCCGTGTTTGTGGACTTCTTTGGATCTTCGTTCGCACAAGTTTGATGCCAATGTTGCATCTTCACTTGCTTCTAGATGTGTGCATCTACAGAAGCTTAGGTTTCATGGTGCAGAGGCTGCTGAGGCACTACTTCATCTTCGAGCTAAGAACTTGCGCGAATTAAGCGGTAACGGTTGCTGGAAGATGACCGATATAAATCTTGCTGTGATTGCTGCCCGGCATGAGTTACTCCAGAGTCTTCAGCTTGGACCAGATTTTTGTCACGAAGTTACTAGTGAAGCTATAAAAGCAATAGCTCACTGCTGTCCTAGTTTGAATAAACTCAGGCTCTCAGGTATTAGGGATGTAAATGCAGATTCTATTAATGCATTGGCTACCTATTGTCCAAAGTTGACTGATATCGGGTTCATCGACTGCCTGTGTGTTGACGAGCTTGCGTTGGGAAATGTGCAATCGGTTCGTTTCCTTTCTGTCGCGGGGACACCAAGTATGAAGTGGAGTGTGGTTTCACATCTTTGGCATAAACTTCCTAACCTGACTGGATTGGATGTTTCAAGAACCGATATTGGTCTGTCCGCTGTTTCAAGTTTGTTATCCTTATCACTAAATTTGAAGATTTTGATTGCTTTGAATTGTCCTATCCTCGAAGAAGAGACTAGCTTTTCTGCTAGTAAATATAAAAATAAGTTGTTGATTTCCCTATCAACGGATATTTTTAAAGGACTAGGTTCTTTATTTTTCGATAATACAAATAGAGGAAAGAATGTGTTTTTGGACTGGAGGACTTCAAAGAGTAATAATGATAAGGGTCTTGATGAAATTATACCTTGGCTTGAATGGATGCTGTCACATATACTTTTGCATTCTGCTGTGAGCCGTCAACAGGGAGGTCTTGATAATTTCTGGGTTGAACAAGGTGCATCACTCTTGCTTAGTCTAATGCAGAGTTCTCAAGAGGATGTTCAGGAGCGGGCAGCCAGAGGTCTTGCAAATTTTGTTGCAATTGATGATGAAAATGCTAGCATTGATTGTGAAAGGGTTGAAGCAGTTATGAGAGATGGTGGTATACATCTCCTTCTTGGCCTTGCAAAATCTTACAGGGAAGGGCTTCAGTCCGAGGCAGCTAATGCTATTGCGAATTTGTCATTGAATGCTAATTTTGCGAAGGCCGTTGCAGAAGAGGGTGGGATTGAGATTCTAGTGATGCTTGCACGTAAGTGCAAATACGAGGGAGTGCAAGAGCAGGCTGCTCGTGCCTTGGCTAATTTATCTGTCGGACAAGAAGCGGGTGCTTTTGAGGCTCTTGTTCAACTTACGCATTCTCTCCATGAGGGTGTCAGGAAAGAAGCTGCTTATGCACTTTGGAATTTGTTATGTGACGATAGAAATCACGAGGCCATTGCAGCAGCTGGTGGAGTTCAAGCTTTCGTTGCTCTTGCCCGATCTTGTTCTAATGCTTCCCCTGGACTTCAAGAGAGCGCTGCTGGTGCTCTATTGGCATTGTCATTTTCTGAAGCCAATAGCATTGCTATTGGACGAGAAGGAGGAGTTGCACCTCTGATTGCACTGGCACGGTCCGAAGCAGAGTATGTTCGTGAAAGCGCTGCAGGAGCACTATGGAATCTTTCTTTCAACCCTGGTAATGCTTTACGAATAGTGGAGGAAGGTGGAGTAGCTGCACTTGGTGATCTCTGTTCTTCATCAGTGTCAAAAATGACACGGTTTAATGCGGCATTGACTTTGTCCTGCATGTTTGATGGGAGAATGGATGAATTCTCTTTAGTCGGTACCTTGTCAGAAAGTGCTTCTAAGAGTGTGTGCCTGGATGGAGCCAGAAGGATGGCTATGGAACACATTGAAGCATTCATCCGTATGTTTTCCAATCAACAAACATTTGCAGCTGCTGCTGCGTCATCGGTTCCTGCAGCACAAGCACATGTTACTGAAAGTGCTCGCATTCAAGAAGCGGGACATCTTGAATGCAATGGTGCTGAAGTTGGAAGATTTGTTACTATGCTACAAAATCCGTCGTCTATACTCAAAACTTTTGCTGCATTTGCTCTTCTACAGTTTACAATACCTGGTGGACAACACGTCATTCACCATGCCAGCCTCATGCAGAAGGCAGGTGCAGCAAGAGTTCTGCGCAGTGTAGCCGCCGCAACAACCACACCTCTTGAAGCAAAAATCTTTGCCAGGATTGTTCTTCGTAATCTCGAGTATCACAACATAGAGTATACTGTTTAG 2379 0.4393 MPQGVVDWRSLPDDILIQLLSCLSYRDRASLSACCKKWRVLGNSPCLWTSLDLRSHKFDANVASSLASRCVHLQKLRFHGAEAAEALLHLRAKNLRELSGNGCWKMTDINLAVIAARHELLQSLQLGPDFCHEVTSEAIKAIAHCCPSLNKLRLSGIRDVNADSINALATYCPKLTDIGFIDCLCVDELALGNVQSVRFLSVAGTPSMKWSVVSHLWHKLPNLTGLDVSRTDIGLSAVSSLLSLSLNLKILIALNCPILEEETSFSASKYKNKLLISLSTDIFKGLGSLFFDNTNRGKNVFLDWRTSKSNNDKGLDEIIPWLEWMLSHILLHSAVSRQQGGLDNFWVEQGASLLLSLMQSSQEDVQERAARGLANFVAIDDENASIDCERVEAVMRDGGIHLLLGLAKSYREGLQSEAANAIANLSLNANFAKAVAEEGGIEILVMLARKCKYEGVQEQAARALANLSVGQEAGAFEALVQLTHSLHEGVRKEAAYALWNLLCDDRNHEAIAAAGGVQAFVALARSCSNASPGLQESAAGALLALSFSEANSIAIGREGGVAPLIALARSEAEYVRESAAGALWNLSFNPGNALRIVEEGGVAALGDLCSSSVSKMTRFNAALTLSCMFDGRMDEFSLVGTLSESASKSVCLDGARRMAMEHIEAFIRMFSNQQTFAAAAASSVPAAQAHVTESARIQEAGHLECNGAEVGRFVTMLQNPSSILKTFAAFALLQFTIPGGQHVIHHASLMQKAGAARVLRSVAAATTTPLEAKIFARIVLRNLEYHNIEYTV* 793
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g2532 792 Gene3D - 472 790 IPR011989 -
Tpr2g2532 792 Pfam Armadillo/beta-catenin-like repeat 550 587 IPR000225 GO:0005515
Tpr2g2532 792 Pfam Armadillo/beta-catenin-like repeat 431 468 IPR000225 GO:0005515
Tpr2g2532 792 Pfam Armadillo/beta-catenin-like repeat 472 501 IPR000225 GO:0005515
Tpr2g2532 792 Gene3D - 352 471 IPR011989 -
Tpr2g2532 792 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 474 516 IPR000225 GO:0005515
Tpr2g2532 792 ProSiteProfiles F-box domain profile. 5 51 IPR001810 GO:0005515
Tpr2g2532 792 SUPERFAMILY RNI-like 28 263 - -
Tpr2g2532 792 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 515 560 IPR000225 GO:0005515
Tpr2g2532 792 SMART arm_5 388 427 IPR000225 GO:0005515
Tpr2g2532 792 SMART arm_5 471 503 IPR000225 GO:0005515
Tpr2g2532 792 SMART arm_5 428 469 IPR000225 GO:0005515
Tpr2g2532 792 SMART arm_5 589 630 IPR000225 GO:0005515
Tpr2g2532 792 SMART arm_5 548 588 IPR000225 GO:0005515
Tpr2g2532 792 SMART arm_5 504 547 IPR000225 GO:0005515
Tpr2g2532 792 Pfam F-box-like 8 54 IPR001810 GO:0005515
Tpr2g2532 792 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 398 440 IPR000225 GO:0005515
Tpr2g2532 792 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 439 472 IPR000225 GO:0005515
Tpr2g2532 792 Gene3D Ribonuclease Inhibitor 3 279 IPR032675 -
Tpr2g2532 792 SMART fbox_2 11 51 IPR001810 GO:0005515
Tpr2g2532 792 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 559 601 IPR000225 GO:0005515
Tpr2g2532 792 PANTHER PROTEIN ARABIDILLO 1 3 449 IPR044583 -
Tpr2g2532 792 PANTHER PROTEIN ARABIDILLO 1 443 778 IPR044583 -
Tpr2g2532 792 SUPERFAMILY ARM repeat 350 630 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g2532 Tpr-Chr2 30181947 30185561 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g2532 285 615 U-box Gene Family AT5G67340 28.319 1.21e-17 85.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g2532 - - gmx:100819086 771.926