Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g2530 ATGTCTGACCTATTTGTGCATACAAGGATTGATTACTTGTCCGAGGTGGTTCCCGGAAGAACAGCTTGGAGGTTTACGAGGAGTTTATGTCTGACCTATTTGTGCATACAAGAGGAGTTTATGTCTGACCTATTTGTGCATACAAGTGACGATCGAGTTGCGCTTCCATGGTTAAAGTTACACTATAGACCATCTGGTACCATTTTTGTGCTTGATCAGACATTTGAATGTTCAATTGAGTGGTCTGGGCAACCTCAGATGATGAATGGAGCTGGTCAAAAACTGACTACTAATGATGCCTTAGCGTATCTCAAGGCAGTAAAGGATATTTTTCAAGATAAGAGGGATAAATATGATGAATTTTTGGAGGTCATGAAAGAGTTTAAAGGACAGAGAATTGATACTGTGGGTGTCATCGCTAGAGTGAAGGATCTTTTTAGAGGTCACACAGATTTGATATTAGGATTCAACACCTTTTTGCCAAAGGGATATGAAATCACCCTTCCGATAGAGGATGAGCAACCTCACCCGAAAAAGCCAGTTGAATTTGATGAAGCTATGAGTTATGTGAACAAGATAAAGACTCGGTTTCGTGGCGATGATCGTGTTTACAAGTCATTTCTAGAAATATTGAATATGTACAGAAAGGAAAATAAGTCTATCGACGCGGTCTACCAGGAGGTTGCTGCCCTCTTTGAAGACCACCCAGATCTTCTTGACGGGTTTATTCAGTTTCTTCCTGACGCTATCACAGCTGCCTCTACTCATGCTGCTGCTCGGGATTCTGTGTTTCGTGATAGGCGCTCTGCAATGCCAACAGTGCGGCAAGTGCATGTTGAAAAGAGAGAAAGGACCATTGTTTCACACGGTGACCGTGACCCCAGTGTTGACCGTCCTGACCCAGAGCATGATGGACGCTTGTTCAGGGCTGAAAAGGAGCATAAGAGACGTGTGGAGAAGGAAAAGAGCCGCAGAGAAGATAGAGACAGGAGAGAACGAGAACGAAATGATAGAGATTATGAGCATGACAGGGGTCGAGATAGGGAACGGTTATCCCAGAAACGGAAATCTGATCATAAGGTTGAAGACTCAGGAGCTGAACCATTGCTTCATGCAGATCAAAATTTTGGTATGTATAGTCAAGAGTTAGCTTTCTGTGCTGAAGTCAAAGAGAGATTACGAAATCCTGATGACTACCAGGAATTTTTGAAGTGTTTACATATTTACAGCAGGGAAATTATTACTCGACAAGAATTGCAGTCACTGCTTGTGATGTTAATAGGTACAAAACTTCAACATGTTGTAGCCACTTTAGCACTTGAAATCTGGGAGCAGCAGGGTCCATCTGCCAGAACACAAGTAAAGCCACGCGATGGTTTGTTTTGGTTCAACAAACCAGAGATATTGTTATGGCTAATACAATTTGTGATATTTCAGAATGCCTTTGAAATGGCTTCATTTATTTGGACATTGTGGGGATTTAAAGAACAATCATACTTCATGAGACACCATTATATGATCATCATTCGGCTGACATGTGGAGTTTTTGTTCAGTTCTGGTGTAGCTATATGACAGTGCCCCTTAATGTGATAGTTTCACAGATGGGATCGCGATGTAAGAAGGCTCTAGTGACAGAGAGTGTTAGAGATTCCTTACACAGTTGGTGTAAGAGAGTAAAACAGAAATCTAAGCATGATCATTCTCTGCATTCACATACCGCTAGATCAATATGTTCCCTGGGATCAACAATCGATGAGAGGGATGAGATAACAGTGGTATCTGGCACTCTAACTCGAACAACTTCCTTAGACTTAGAGTCTTTGAATCAGATGACAGTAACTTCAGTAGACCAGCTGAATTTTCTGACTTCAAACAACCTCGATGATTCAACCGATTTGTCAGAATCCGTACATATTAATTCACATTACAATAATGTTGACAACGGAGAGGAAGCTAAAGTTGAGACTCTTCTTGATTTGTTTCACAAAACATGA 1995 0.4135 MSDLFVHTRIDYLSEVVPGRTAWRFTRSLCLTYLCIQEEFMSDLFVHTSDDRVALPWLKLHYRPSGTIFVLDQTFECSIEWSGQPQMMNGAGQKLTTNDALAYLKAVKDIFQDKRDKYDEFLEVMKEFKGQRIDTVGVIARVKDLFRGHTDLILGFNTFLPKGYEITLPIEDEQPHPKKPVEFDEAMSYVNKIKTRFRGDDRVYKSFLEILNMYRKENKSIDAVYQEVAALFEDHPDLLDGFIQFLPDAITAASTHAAARDSVFRDRRSAMPTVRQVHVEKRERTIVSHGDRDPSVDRPDPEHDGRLFRAEKEHKRRVEKEKSRREDRDRRERERNDRDYEHDRGRDRERLSQKRKSDHKVEDSGAEPLLHADQNFGMYSQELAFCAEVKERLRNPDDYQEFLKCLHIYSREIITRQELQSLLVMLIGTKLQHVVATLALEIWEQQGPSARTQVKPRDGLFWFNKPEILLWLIQFVIFQNAFEMASFIWTLWGFKEQSYFMRHHYMIIIRLTCGVFVQFWCSYMTVPLNVIVSQMGSRCKKALVTESVRDSLHSWCKRVKQKSKHDHSLHSHTARSICSLGSTIDERDEITVVSGTLTRTTSLDLESLNQMTVTSVDQLNFLTSNNLDDSTDLSESVHINSHYNNVDNGEEAKVETLLDLFHKT* 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g2530 664 Pfam Mlo family 422 574 IPR004326 GO:0006952|GO:0016021
Tpr2g2530 664 PANTHER PAIRED AMPHIPATHIC HELIX PROTEIN SIN3-LIKE 2 ISOFORM X1 88 429 - -
Tpr2g2530 664 Gene3D Paired amphipathic helix 99 161 IPR036600 GO:0006355
Tpr2g2530 664 MobiDBLite consensus disorder prediction 274 367 - -
Tpr2g2530 664 ProSiteProfiles PAH domain profile. 93 163 IPR003822 GO:0006355
Tpr2g2530 664 SUPERFAMILY PAH2 domain 176 248 IPR036600 GO:0006355
Tpr2g2530 664 MobiDBLite consensus disorder prediction 274 369 - -
Tpr2g2530 664 ProSiteProfiles PAH domain profile. 179 249 IPR003822 GO:0006355
Tpr2g2530 664 Pfam Paired amphipathic helix repeat 203 246 IPR003822 GO:0006355
Tpr2g2530 664 Pfam Paired amphipathic helix repeat 116 160 IPR003822 GO:0006355
Tpr2g2530 664 Gene3D Paired amphipathic helix 178 250 IPR036600 GO:0006355
Tpr2g2530 664 SUPERFAMILY PAH2 domain 379 428 IPR036600 GO:0006355
Tpr2g2530 664 SUPERFAMILY PAH2 domain 92 162 IPR036600 GO:0006355
Tpr2g2530 664 Gene3D Paired amphipathic helix 376 433 IPR036600 GO:0006355
Tpr2g2530 664 PANTHER SIN3B-RELATED 88 429 IPR039774 GO:0003714
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g2530 Tpr-Chr2 30148780 30157480 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g2530 421 664 MLO family AT1G11000 54.317 1.44e-81 267
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Tpr2g2530 Mlo 2.9e-55 No_clan