Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g2504 ATGACACCAAAGAAACGCCCCACTTCTCCTCCTCTCGAGGATGATCAGAAACCTTCAACCCAAAAGCAACCAGAAGACAAAGTAGCTCACAAAGAAGAAGAAGAAGATGAAGATGATTCATCCGAAGAAGAAGAAGAAGAAGAAGGTTCATCATCTGAAGAAGAAGAAGAAGAAGAAAAAGAAAAAGATCAATCTCAAACCGCTTCCAAAAACCCTCCACCTTCTACTCCTATCTCAAACCCTAAACCGGCTTCTGAATCTGAATCCGAATCTGGATCAGAATCCGGTTCTGACTCTGGATCCGGATCCGAATCCGAAACTGATTCCCAACCGGAACCAACTCTACCTCTTAACCCCAAAGTTGTTAAACCACTCGCTTCCAAGCCAATGAAGGCCCAACCAAAGGCCCAAACCCAGGCCCAAACATATTCTATACTAGCCAGATCTGGAACTAAACGTGCAGCTGAAAACGGAAATGACTCAAACCGTTCAAAGAAGAAAACAACCGATGTTGCCGTCACCGTCACCACCGGTGGTGATTCCGACGACGATAATGAGAATGAAACTGAGGAAGACGTGAAATTGACTGGTGAAGACTCAAAGAAGAGTACTCAGAGACTTTTCAGCGAACAAGATGAGCTTACTATTCTCAAAGGACTCGCTGATTTCATTTCCAAAACTAAAAAGGATCCGTTGAAGGACGCATTGGCATTTCATGGTTTCGTGAAGAAATCGCTTAGCGCTGAAGCTAGCAGCGCACAATTGAAGCGGAAGGTTCGTACATTGAAGAAGAAGTTTGAAACTAGTGACAGTTTCACTAAACCACATGATAAGAAAGCATTCGAGCTTTTCAAGAAGGTTTGGGGTAATACTGGTGCAAATGAAGCTGAAGAAAATGGAAAAGTTAATGGGAAAAGTGTTAAGAAAGAATTAGTTATATCTACTAAGAAGGAAGCTGCAAAAGTGAAAACTGTTGTTGATAATAGTTTGATTGTGAGTGAACTGATTCGTTTTGGTGTTGTTGCTGGTTCGTCTGTTTTGAATAAGGATTCTTTGGAAAGGGGGTTGGAATTGATCGAGGAATCGAAGAGAGTTGAATTTGTGGAAAAGTGGAAGCAGGTTCAAATTGCTGAAATGGAGTTGCTTGTGAGACGTTCACAGCTGGCTAAGGAACAATTTAACTTGTTATTGCAGGCACTCAAGAAATCAAGCAAGTAG 1218 0.4195 MTPKKRPTSPPLEDDQKPSTQKQPEDKVAHKEEEEDEDDSSEEEEEEEGSSSEEEEEEEKEKDQSQTASKNPPPSTPISNPKPASESESESGSESGSDSGSGSESETDSQPEPTLPLNPKVVKPLASKPMKAQPKAQTQAQTYSILARSGTKRAAENGNDSNRSKKKTTDVAVTVTTGGDSDDDNENETEEDVKLTGEDSKKSTQRLFSEQDELTILKGLADFISKTKKDPLKDALAFHGFVKKSLSAEASSAQLKRKVRTLKKKFETSDSFTKPHDKKAFELFKKVWGNTGANEAEENGKVNGKSVKKELVISTKKEAAKVKTVVDNSLIVSELIRFGVVAGSSVLNKDSLERGLELIEESKRVEFVEKWKQVQIAEMELLVRRSQLAKEQFNLLLQALKKSSK* 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g2504 405 Pfam Protein of unknown function, DUF573 205 289 IPR007592 GO:0006355
Tpr2g2504 405 MobiDBLite consensus disorder prediction 31 61 - -
Tpr2g2504 405 MobiDBLite consensus disorder prediction 194 208 - -
Tpr2g2504 405 MobiDBLite consensus disorder prediction 8 30 - -
Tpr2g2504 405 MobiDBLite consensus disorder prediction 132 148 - -
Tpr2g2504 405 MobiDBLite consensus disorder prediction 1 208 - -
Tpr2g2504 405 PANTHER BNAANNG10740D PROTEIN-RELATED 20 402 IPR007592 GO:0006355
Tpr2g2504 405 Coils Coil 42 62 - -
Tpr2g2504 405 MobiDBLite consensus disorder prediction 81 114 - -
Tpr2g2504 405 PANTHER STOREKEEPER PROTEIN 20 402 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g2504 Tpr-Chr2 29952198 29953719 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g2504 95 401 GeBP Transcription Factor Family AT1G61730 32.047 3.16e-29 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Tpr2g2504 DUF573 2.3e-22 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g2504 - - mtr:MTR_2g010790 330.487