Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g2501 ATGTTTCATTCTCTCATAAACAAGCTTCAATGCAAACCAAATCCAAAAGAAGTTCATGATCCAAAGAAAATTAGGCACCAAAAAAAAGGTTTACTTGATCATTCAAATATCATCCAAGGAAGCAAGAGGTACTTAACAAATTCATCAAGTTTCTGTCAAGAATCTGAAGGGAGCCTTAATATAAGTGATCCTATAATCAATGATAGCTCATCATTAAGTCATTGCAACAGTGGAATTAAGGATTGGGAAGGTTCTTTTAGAACAACAAGAAGGGTATCTACATCTTCAAGGTTAATCAATCATGTTGATGGTTATAATGAAGAAAATGTCTCATCTAAAACAAGCTTGTTTGTTCAGGTGGATTCTGATGATAATGGTCCTTCAATATTGATGTGTTACAAATGTGGTGAGAAACTGAAAAACCTTAATGCTGTTGAAACACATCATATCACTGAGCATTCAGTCACTGAACTTGAAGAAGATTCATCTAGACATATTGTAGAAACAATATGTGAAAGTGGACAAAGCTTGGTTTGTTCTGAATTGTGGCAAATTGATTGCATACTAAAAATCCACAACATCCCAAAAACACTTGCATGCTTTGAGGAGTATAGAGAAAAGGTGAAGATCAATGCCAACAAGCTACATAATAAGAATCATCATCCACGTTGTCTTGTTGATGGAAATGAGCTTTTAATGTTCCATGGCACTAACATTGCATGCTCTCTTGGAACAAATAATTCTTATAGCTTGTGCAATTTAGACTATTGTGGTGTATGTCAAATTCTTAGGCATGGCTTTTCTACTAACAAGGAATTTCAAGGTGCATTAGGAGTTTACACTACTTCAACAAGTGGAAAAGCCTTTGATTCCATTGATGAGACAGCTTGTACAAGAAAATCAGTTGTAGTGTGTAGAGTAATTGCTGGGAAAGTTCATTGTCCTTTTGAAGAAATTCAAGAAAAAGTTGATTCAAGATTTGATTCATTGGCTGAAAAGTTAAGTAAGAATGAAAATATTGAGGAACTAAACTTGTTGAATCCTAAAGCTTTGCTTCCTTGCTTTCTGGTAATCTACAAACAACAAACAATGAAAATTAAGAGGTTCCCCTCAAGCTCAAGGATAAGTAGCACTTTTCCAAATATTTATCATAGTAATATTTTTCATAATTAA 1173 0.3376 MFHSLINKLQCKPNPKEVHDPKKIRHQKKGLLDHSNIIQGSKRYLTNSSSFCQESEGSLNISDPIINDSSSLSHCNSGIKDWEGSFRTTRRVSTSSRLINHVDGYNEENVSSKTSLFVQVDSDDNGPSILMCYKCGEKLKNLNAVETHHITEHSVTELEEDSSRHIVETICESGQSLVCSELWQIDCILKIHNIPKTLACFEEYREKVKINANKLHNKNHHPRCLVDGNELLMFHGTNIACSLGTNNSYSLCNLDYCGVCQILRHGFSTNKEFQGALGVYTTSTSGKAFDSIDETACTRKSVVVCRVIAGKVHCPFEEIQEKVDSRFDSLAEKLSKNENIEELNLLNPKALLPCFLVIYKQQTMKIKRFPSSSRISSTFPNIYHSNIFHN* 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g2501 390 Gene3D - 146 365 - -
Tpr2g2501 390 SUPERFAMILY ADP-ribosylation 160 361 - -
Tpr2g2501 390 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 2 361 - -
Tpr2g2501 390 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 2 361 - -
Tpr2g2501 390 ProSitePatterns Zinc finger C2H2 type domain signature. 132 153 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g2501 Tpr-Chr2 29934780 29936411 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g2501 86 360 C2H2 Transcription Factor Family AT5G54630 49.477 3.57e-80 252
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g2501 - - gmx:100792577 392.504