Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g2494 ATGGCAGAGGAGTTTCAAGCTGGAATTTGTGGTGAAACATGGCGGAGTATTAATAATTCAACAAGAAGTGTATTTCCTATTATGATGAATTCATCATCAACATGTTCTGTTGCAGCTAATGATGTAGGGAACTATAGTACTTGGCAAAATGAACTTTTGGGTTTGAAAGAAACAAGGACTTGTTCTATTGATGAAACTAATAACTTTGATTTTTCTGATTGTGCTTTGAGTTTTCTTGATCCTCAAAAGCCACCACAACAGAGTGAATCATTAGCTAATGGAAGTGGTAGCATGTTGATTGATTCCACCTTACAAATTATGGGTTTTGATCTCTCATCTCCAACTTCATCTAATTGGAATCACTCTCTATTTAATTGTAATGGAAGGCAAGAGAGCAATTTTCACTCTATGATTCAAGAAGAAACATGTTTAGATTCATCTAATGATTCACAAATCCAAGTTTCAACAGTTGATACTTTCATCAAGCCGATGGATCAACAATTTTCCATAGATTCCTATGGTTACCCTTCAAATTTGATACAAAGTTTATTTGATAATGATCCTCAACCTCAATCACATAACTCACTTTATACCAACCCTTCTTCTATGTCTTATTCATCTTCCAATGAACTTTCACCAACATGGTCTAATGTATCTTCTCTTATGAAACCTTCAATGCCAAAACAACAACTTAGTAGTGGATTGCAATTTTCCAATAATACCCCTTTTTGGAATGCTTCAGCTGAGGCACTTAATGACATCAGAGCTGGAGTTTTGGCTTCATCACAACCACAATATCAATCTCCTAATTTTGATCAAGATAACAAATTCAATTCCTCAAATGCTCTATTAAACAAGCTAAAGAGAGAAAAATCTCCAGAAACAAAAAACTCATCTGAAGCTGCAATTAAGAGGCCAAGAATTGAGACTCCATCTCCATTACCAACTTTTAAGGTTAGGAAAGAGAAGTTAGGGGACCGTATCACAGCTCTTCAGCAATTGGTTTCACCTTTCGGAAAGACGGATACAGCATCTGTTCTTCATGAAGCCATTGAGTACATCAAGTTCCTTCATGATCAAGTCAATGTTTTGAGCACTCCATATATGAAAAATGGATCTCCCATTCAACACCAACAGGTTTGTGATAATGTGAAGGACTCACAAGAGAAAAAACAAGACTTAAGAAGTCAAGGGCTTTGTTTGGTGCCAATTTCAAGCACATTTCCGATGGCTAATGAAACTCCCGTTGATTTCTGGACGCCTACGTTTGGAGGCCCACTTTTTGGCCAATAG 1293 0.3666 MAEEFQAGICGETWRSINNSTRSVFPIMMNSSSTCSVAANDVGNYSTWQNELLGLKETRTCSIDETNNFDFSDCALSFLDPQKPPQQSESLANGSGSMLIDSTLQIMGFDLSSPTSSNWNHSLFNCNGRQESNFHSMIQEETCLDSSNDSQIQVSTVDTFIKPMDQQFSIDSYGYPSNLIQSLFDNDPQPQSHNSLYTNPSSMSYSSSNELSPTWSNVSSLMKPSMPKQQLSSGLQFSNNTPFWNASAEALNDIRAGVLASSQPQYQSPNFDQDNKFNSSNALLNKLKREKSPETKNSSEAAIKRPRIETPSPLPTFKVRKEKLGDRITALQQLVSPFGKTDTASVLHEAIEYIKFLHDQVNVLSTPYMKNGSPIQHQQVCDNVKDSQEKKQDLRSQGLCLVPISSTFPMANETPVDFWTPTFGGPLFGQ* 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g2494 430 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 83 418 - -
Tpr2g2494 430 CDD bHLH_AtbHLH_like 314 365 IPR045239 -
Tpr2g2494 430 MobiDBLite consensus disorder prediction 287 303 - -
Tpr2g2494 430 MobiDBLite consensus disorder prediction 287 306 - -
Tpr2g2494 430 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 318 376 IPR036638 GO:0046983
Tpr2g2494 430 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 308 357 IPR011598 GO:0046983
Tpr2g2494 430 PANTHER TRANSCRIPTION FACTOR BHLH123 83 418 - -
Tpr2g2494 430 Gene3D - 318 373 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g2494 Tpr-Chr2 29865628 29869049 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g2494 1 428 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G61660 41.096 1.74e-73 234
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g2494 - - gmx:100794682 526.168