Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g2490 ATGAAAGTGCTAAATGTTATCTTTGTTTGTTCTTGTCTATCAATCCTTCATAAAATATCATTTGCAGCTGATACCTTGACTCAAAATTCTTCAATCATAGATGGCCAAGAACTCATTTCTGCTAGACAAATTTTTTCTCTAGGTTTCTTTAGTCCAGGAAGCTCAAATAAATACTACTTAGGGATATGGTACAAGAATATCACACCTCAAACAGTTGTTTGGGTTGCAAACAGAGAAAAACCACTTAATAACTCAAGTGGAAAATTAACCATTGGTGCTGATGGCAATATCGTACTTGTTGATGGAGTAGGTAACAAGCTATGGTTTACAAATTCATCAAGATCAATTCAAAAGCCACTTGTAAAGTTGTTAGATTCTGGAAACTTGGTCTTGATGGATGAAGAGAGTTACATATGGCAAAGCTTTGATTATCCAACAGACACAATGTTACCTGGCATGAAGTTAGGTTGGGATAAGAGCTCGGGGATTGATAGATATTTGACGTCGTGGAAGAGTGACGGTGATGATCCTTCTTATGGAAGTTTTACTTACAACTTTGATTACAAAGAGTTTCCGGAGTTGGTGATTCGTCAAGGAAAGAATATCACATTCAGAAGTGGGATTTGGAATGGCGTTCGTTTTAATTCCGATGATTGGACATCGTTTAGAGGAGTTACGGCTTTCAAGCCACAACTTTCGGTAACAAAGAATGAGGTAGTGTATTGGGATGAACCTGGAGATAGATTGTCGAGGTTTACGATGAGGGATGATGGATTGTTGGAAAGATATATATGGGACAATAACATTGTTAAGTGGACTAAAATGTATGAGGCAAGAAAAGATTTTTGTGATAACTACGGAGCATGTGGGATGAATGGTGTTTGTAATATTGATGATGTTCCTGTTTATTGTGACTGTTTGAAAGGCTTCAAACCTCGATCGCAAGACGAATGGGATTTGTTTAATCGTTCCGGTGGGTGTATTAGGAAAATACCTTTGAACTGCACACAAGCTGATAGGTTTCAGAAATTTAGCAGGGTGAAATTGCCTATGTTGTTGCAGTTTTGGACAAATAGTAGCATGAGTCTCGAGGAATGTGAGGTCGAGTGCTTGAAGAATTGTTCTTGCACTGCATATGCAAACTCTGTCATAAATGAAGGACCTCATGGTTGCTTGATTTGGTTTGGTGACTTGATTGATATTAGGTTGCTTATAACTGAAGATAGTGCACAACTTGAGCTTTATGTAAGGTTAGCTGCTTCAGAAATAGATTCCACCACTAGTGCTAGTAAAAGGAGAAAGATAGCATTGATTATTTCTGCATCCATGGCAGTGTTTATTTTGTGTATCATTTTCTACCTTTGCAAAAAGTATGCTACAGTAAGAAAACGGAAGACCACTGCTGATTTAGTAAAAAGAAACCAGAATGAAGAGCAAGCGTCGCCTCTTTTTGATATAGATATCATTCTAGCTGCTACAAACAGTTTTTCTATTGAGAACAAGATTGGAGAAGGAGGTTTTGGCCCAGTGTACAAGGGTATATTGTCTCAAGGACAAGAAATAGCTGTGAAAAGGCTATCAAAAACTTCAAAACAAGGAGTCACAGAGTTCATGAATGAAGTTGGATTGGTCTCCAAGCTACAACACCGCAATCTTGTGAGTGTTTTGGGAGGATGTACTTATGGAAATGAAAGAATGTTGGTCTATGAATACATGCCTAATGGTAGTTTGAACCACTTCATTTTCGATCCTACACAAGGGAAAATTTTGCAGTGGAGGAAACGTTATGATATTATTACTGGAGTTGCTCGAGGACTACTTTATCTTCATCAAGATTCAAAACTAACCATCATTCATAGGGATCTGAAAACTAGTAATATTCTACTTGACAGTGAATTAAACCCCAAGATTTCTGATTTTGGTGTGTCACACATCTTGGAAGGAGATAGTTCAGCTGTAACAACGAATAAAATTGTCGGAACAATTGGTTATATGTCTCCCGAGTATGCGGTAAATGGGCTCCTTTCCCTCAAGTCCGATGTATTTAGCTTTGGAGTTATAGTGTTAGAGATATTGAGTGGCATGAGAAATAATCACTTCAAGAATCAAGATCATCCCCATAATCTCTTAGGACAGGCATGGATGTTATGGAAAGAAGGGCGAGCATTGGAATTCATCGATGCGAATATGGACCTTACAAGCATCCCATATGAAATACTAAGGTGCCTACAAGTTGGTCTCTTGTGTGTTCAAAAGTTCCCCGGAGATAGACCAGATATGTCTTCTGTGGTTTTTATGTTAGGCAATGAAAGTATTGCACTTGCACAACCAAACAAGCCTGGCTTCTTTTCAGATGAGATAGAGTTTCATGATTATAGTGAGAAGGACTCCTTTAGCAACAATGCTATGACTATTACCTTATTGGAAGCACGAAATTAG 2439 0.3809 MKVLNVIFVCSCLSILHKISFAADTLTQNSSIIDGQELISARQIFSLGFFSPGSSNKYYLGIWYKNITPQTVVWVANREKPLNNSSGKLTIGADGNIVLVDGVGNKLWFTNSSRSIQKPLVKLLDSGNLVLMDEESYIWQSFDYPTDTMLPGMKLGWDKSSGIDRYLTSWKSDGDDPSYGSFTYNFDYKEFPELVIRQGKNITFRSGIWNGVRFNSDDWTSFRGVTAFKPQLSVTKNEVVYWDEPGDRLSRFTMRDDGLLERYIWDNNIVKWTKMYEARKDFCDNYGACGMNGVCNIDDVPVYCDCLKGFKPRSQDEWDLFNRSGGCIRKIPLNCTQADRFQKFSRVKLPMLLQFWTNSSMSLEECEVECLKNCSCTAYANSVINEGPHGCLIWFGDLIDIRLLITEDSAQLELYVRLAASEIDSTTSASKRRKIALIISASMAVFILCIIFYLCKKYATVRKRKTTADLVKRNQNEEQASPLFDIDIILAATNSFSIENKIGEGGFGPVYKGILSQGQEIAVKRLSKTSKQGVTEFMNEVGLVSKLQHRNLVSVLGGCTYGNERMLVYEYMPNGSLNHFIFDPTQGKILQWRKRYDIITGVARGLLYLHQDSKLTIIHRDLKTSNILLDSELNPKISDFGVSHILEGDSSAVTTNKIVGTIGYMSPEYAVNGLLSLKSDVFSFGVIVLEILSGMRNNHFKNQDHPHNLLGQAWMLWKEGRALEFIDANMDLTSIPYEILRCLQVGLLCVQKFPGDRPDMSSVVFMLGNESIALAQPNKPGFFSDEIEFHDYSEKDSFSNNAMTITLLEARN* 813
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g2490 812 SMART ntp_6 336 418 IPR003609 -
Tpr2g2490 812 SUPERFAMILY alpha-D-mannose-specific plant lectins 72 175 IPR036426 -
Tpr2g2490 812 ProSiteProfiles PAN/Apple domain profile. 335 419 IPR003609 -
Tpr2g2490 812 ProSiteProfiles Protein kinase domain profile. 496 772 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g2490 812 Gene3D Transferase(Phosphotransferase) domain 1 572 778 - -
Tpr2g2490 812 CDD PAN_AP_plant 332 419 - -
Tpr2g2490 812 SUPERFAMILY Protein kinase-like (PK-like) 480 767 IPR011009 -
Tpr2g2490 812 CDD B_lectin 29 145 IPR001480 -
Tpr2g2490 812 Pfam PAN-like domain 335 401 IPR003609 -
Tpr2g2490 812 Pfam D-mannose binding lectin 71 171 IPR001480 -
Tpr2g2490 812 ProSitePatterns Serine/Threonine protein kinases active-site signature. 617 629 IPR008271 GO:0004672|GO:0006468
Tpr2g2490 812 Gene3D Phosphorylase Kinase; domain 1 456 571 - -
Tpr2g2490 812 Gene3D - 17 142 IPR036426 -
Tpr2g2490 812 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 8 808 - -
Tpr2g2490 812 SMART blect_4 29 145 IPR001480 -
Tpr2g2490 812 Pfam Protein tyrosine and serine/threonine kinase 497 764 IPR001245 GO:0004672|GO:0006468
Tpr2g2490 812 PIRSF SRK 1 811 IPR024171 GO:0004674
Tpr2g2490 812 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 8 808 - -
Tpr2g2490 812 SMART serkin_6 496 765 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g2490 812 ProSiteProfiles Bulb-type lectin domain profile. 23 144 IPR001480 -
Tpr2g2490 812 CDD STKc_IRAK 502 767 - -
Tpr2g2490 812 Pfam S-locus glycoprotein domain 204 313 IPR000858 GO:0048544
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g2490 Tpr-Chr2 29840913 29844384 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g2490 417 784 Receptor kinase-like Gene Family AT4G38830 51.200 5.87e-116 365
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Tpr2g2490 PK_Tyr_Ser-Thr 5.7e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g2490 - - gmx:102669607 1298.11