Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g2488 ATGCGAGGTTTCTTTCTCTTGTTCTTGTTCATCACTTCATCTTCTTTTCTCATCACAATCTCAACCTCTACAGATACCTTAACCTCATCACAAATTCTCACAACAAATCAAACCCTTGTATCATCTAACCAAACATTCATTCTTGGTTTCATCTCCGAAACAAATTCAAACATATATTTAGCCATATGGTACAAAAACATCAACCCAAGAACAATTGTTTGGGTTGCAAACAGAGACAACCCTCTTCAAAATAATTCAACCAATGGTGGCTTTCTCAAAATTGGTGACAATGGAAACATAGTACTTCTCAATTCATCATTAGATTCCGACAACAACCTCGTATGGTCTTCGAATCAAACAATACTTACTAAAAACCAAGTTGTTCTTCAGCTTTTAGATAATGGAAATTTAGTTCTAAGAGAAAAAAATGTGAATGACCCAACAAAATATCTATGGCAAAGTTTCGATTTTCCAACAGATACTTTGTTACCGTCCATGAAAATGGGTTGGAACTTCGACAAAAAAACCGAAAAGCATTTAACTTCATGGAAGATCACAGGTGAAGATCCTTCAACAGGTGATTATTCATTCAAAATTGATTTTCATGGTTTGCCAGAAATTTTCCTATGGAATGATGAAAATATTATATATCGAAGTGGACCTTGGAATGGTGAAAGATTTAGTGGTGTACCGGAGATGGAACCCAATACAGATTCAATAGTTTTCGATTTTTCATCGAATGAACATGGTGTTAATTACTCGTTTACAATCGGAAATCCATCAATTTTTTCGCGACTGGTGGTGGATTCGTCTGGTGTACTTCAACGTCGAACTTGGGTTGAAAGTAGTAAAACTTGGACAAATTTTTGGTATGCACCGAAAGATCAATGTGATAATTACAAAGCGTGTGGTCCATATAGTGTTTGTGATTCGAATGCTTCACCGGTTTGTGTATGTGTGAAAGGTTTTAGTCCTAAGAATGAACAAGCATGGAAATTGAGAGATGGATCAGATGGGTGTGTGAGGAATATAAATTTGGATTGTGAGAGTGATAAATTTTATCATATGGAGAATGTGAAGTTACCTGAGACAAGTTCTGTGTTTGTGAACATGACAATGGGAATTGATGAATGTGGTGATTTGTGTCATAGGAATTGTTCATGTAGTGGTTATGCTAATGTTTATGTTACTAATGGTGGAAGTGGTTGTGTTATGTGGTTTGGTGAACTTGTTGATATAAGAAGTTATTCTGATGGTGGACAAGATCTTTTTGTTAGATTAGCAGCTTCTGAGATAGGTAACTCTCACAAGGCAAATAATAAAGCTGAGATTATAGGAATTACAATTTCTGCAGCTGTTATAATTTTGGGACTTGGTTTCATATGTAAGAAGAGGAAATTGCTAAGTAAATTTAATGGAAACACAGACAACAGAGGTTCTGTCCAAAGAAGTAGAGATTTGTTAATGAATGAGGTGGTAGTTTCAAGTAAAAGAGGTGGTAGCTCAGGAGAAAGGGACATGGATGACTTAGAGTTACCAATGTTTGATTTTAATACCATAACAATGGCTACAAACTATTTCGTTGAAGCAAATAAACTCGGAGAAGGAGGCTTTGGTATTGTTTATAGGGGAAGGTTGATTGAAGGCCAGGAAATTGCTGTCAAGAGGTTATCAAAAACTTCAGGACAAGGAGTTGAAGAATTTAAGAATGAGGTAAAGTTAATTGCCAGGCTTCAACATAGAAATCTCGTTCGGCTATTAGGTTGCTGCATCGACAAGGATGAGAAGCTTCTAGTGTATGAGTACATGGAAAATAGAAGCCTTGATTCCATTTTGTTTCACAAAACTAGAAAATTCTTATTAGACTGGAAAAGGCGATACGAGATTATATGTGGAATAGCTAGAGGACTTCTTTATCTGCATCATGATTCAAGACTCAGGATTATCCATAGGGATCTCAAGGCAAGCAACATATTACTTGACAGTGAAATGAATCCAAAAATATCAGACTTTGGGATGGCTAGAATATTTGGCCAAAATCAAACCGAAGCAAATACATTGAGAGTTGTTGGAACATACGGCTATATGTCTCCTGAATATGCTATGGACGGAAACTTCTCAGTGAAATCAGATGTATTTAGCTTCGGAGTTCTTGTGCTTGAGATCATAAGTGGAAAGAAAAATAGAGGATTCTACTACGCAAATGATGATATGAATCTTCTAAAAAATGCATGGACGCAGTGGAGAGAAGGCACTGCTTTGGAACTTGTTGATTCGTCAATTGGGGAATCATATACACCATCTGAAGTTCTTAGATGCATACATGTTGGACTATTGTGTGTCCAGGAACGCGCAGAAGATAGGCCAACAATGCCTTCAGTGCTCTTGATGCTTGGCAGTGAAACTGCACTAATGCCAGAACCTAGAAGCCCCGGGTTTTCCCTCGGAGGAAGGTCAAAGAATCCTCCTGAAACTGATTCCTCTTCAAGTAAGCAAGATGAAACATGGAGTGTGAACCAAGTCACTGTCACATTGCTAGATGCTAGGTAG 2550 0.3729 MRGFFLLFLFITSSSFLITISTSTDTLTSSQILTTNQTLVSSNQTFILGFISETNSNIYLAIWYKNINPRTIVWVANRDNPLQNNSTNGGFLKIGDNGNIVLLNSSLDSDNNLVWSSNQTILTKNQVVLQLLDNGNLVLREKNVNDPTKYLWQSFDFPTDTLLPSMKMGWNFDKKTEKHLTSWKITGEDPSTGDYSFKIDFHGLPEIFLWNDENIIYRSGPWNGERFSGVPEMEPNTDSIVFDFSSNEHGVNYSFTIGNPSIFSRLVVDSSGVLQRRTWVESSKTWTNFWYAPKDQCDNYKACGPYSVCDSNASPVCVCVKGFSPKNEQAWKLRDGSDGCVRNINLDCESDKFYHMENVKLPETSSVFVNMTMGIDECGDLCHRNCSCSGYANVYVTNGGSGCVMWFGELVDIRSYSDGGQDLFVRLAASEIGNSHKANNKAEIIGITISAAVIILGLGFICKKRKLLSKFNGNTDNRGSVQRSRDLLMNEVVVSSKRGGSSGERDMDDLELPMFDFNTITMATNYFVEANKLGEGGFGIVYRGRLIEGQEIAVKRLSKTSGQGVEEFKNEVKLIARLQHRNLVRLLGCCIDKDEKLLVYEYMENRSLDSILFHKTRKFLLDWKRRYEIICGIARGLLYLHHDSRLRIIHRDLKASNILLDSEMNPKISDFGMARIFGQNQTEANTLRVVGTYGYMSPEYAMDGNFSVKSDVFSFGVLVLEIISGKKNRGFYYANDDMNLLKNAWTQWREGTALELVDSSIGESYTPSEVLRCIHVGLLCVQERAEDRPTMPSVLLMLGSETALMPEPRSPGFSLGGRSKNPPETDSSSSKQDETWSVNQVTVTLLDAR* 850
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g2488 849 CDD STKc_IRAK 533 798 - -
Tpr2g2488 849 MobiDBLite consensus disorder prediction 820 839 - -
Tpr2g2488 849 Pfam PAN-like domain 348 413 IPR003609 -
Tpr2g2488 849 CDD B_lectin 31 158 IPR001480 -
Tpr2g2488 849 SMART serkin_6 527 798 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g2488 849 ProSiteProfiles Protein kinase domain profile. 527 804 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g2488 849 Pfam D-mannose binding lectin 71 184 IPR001480 -
Tpr2g2488 849 Gene3D Phosphorylase Kinase; domain 1 502 602 - -
Tpr2g2488 849 Pfam Receptor serine/threonine kinase 482 517 IPR022126 GO:0004674
Tpr2g2488 849 PIRSF SRK 1 849 IPR024171 GO:0004674
Tpr2g2488 849 ProSitePatterns Serine/Threonine protein kinases active-site signature. 648 660 IPR008271 GO:0004672|GO:0006468
Tpr2g2488 849 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 14 848 - -
Tpr2g2488 849 Pfam Protein tyrosine and serine/threonine kinase 530 794 IPR001245 GO:0004672|GO:0006468
Tpr2g2488 849 SMART ntp_6 348 427 IPR003609 -
Tpr2g2488 849 MobiDBLite consensus disorder prediction 807 839 - -
Tpr2g2488 849 Pfam S-locus glycoprotein domain 217 327 IPR000858 GO:0048544
Tpr2g2488 849 SUPERFAMILY Protein kinase-like (PK-like) 510 798 IPR011009 -
Tpr2g2488 849 ProSitePatterns Protein kinases ATP-binding region signature. 533 555 IPR017441 GO:0005524
Tpr2g2488 849 SMART blect_4 30 158 IPR001480 -
Tpr2g2488 849 Pfam Domain of unknown function (DUF3403) 800 849 IPR021820 GO:0004674
Tpr2g2488 849 Gene3D - 18 155 IPR036426 -
Tpr2g2488 849 CDD PAN_AP_plant 345 428 - -
Tpr2g2488 849 PANTHER - 14 848 - -
Tpr2g2488 849 SUPERFAMILY alpha-D-mannose-specific plant lectins 71 224 IPR036426 -
Tpr2g2488 849 ProSiteProfiles Bulb-type lectin domain profile. 24 152 IPR001480 -
Tpr2g2488 849 Gene3D Transferase(Phosphotransferase) domain 1 603 805 - -
Tpr2g2488 849 ProSiteProfiles PAN/Apple domain profile. 348 428 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g2488 Tpr-Chr2 29826850 29832771 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g2488 515 818 Receptor kinase-like Gene Family AT4G11530 64.590 2.87e-136 419
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Tpr2g2488 PK_Tyr_Ser-Thr 4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g2488 - - gmx:100797331 1232.62