Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g2487 ATGTGGTTTGGTGTACTTTTTGATATAAGAAGTTATTCTGATGGTGGACAAGATCTTTTTGTTAGATTAGCAGCTTCTGATATAGATAACTCGGGATCAACAAGTGGCTCTCAGAAGAAAAATCATAAAGCTGAGATTATAGGAATTACAATTTCTGCAGTTGTTATAATCTTGGGATTGGGTTTCATTTTTTGTAAGAGGAGGAAATTCCTAAGTAAATTGAACAGGAATACAGACAACAGAGGTTCTCTCCAAAGAAGTAGAGATTTGTTAATGAATGAGGTAGTAGTTACAAGTAAAAGAGGTGGTAGCTCAGGAAAAAGGGACATGGATGACTTAGAGTTACCAATGTTTGATTTTAAAATCATAACAATGGCTACAAACAACTTCATTGAAGCAAATAAACTTGGAGAAGGAGGTTTTGGTATTGTTTATAGGGGAAGGTTGATTGAAGGCCAAGAAATTGCTGTCAAGAGGTTATCAAAAACATCAGGACAAGGACTTGAAGAATTTAAGAATGAGGTAAAGTTAATTGCCAGGCTTCAACATAGAAATCTCGTTCGGCTATTAGGTTGCTGCATCGACAAGGATGAGAAGCTTCTAGTGTATGAGTACATGGAAAATAGAAGCCTTGATTCCATTTTGTTTCACAAAGCTAGAAAACCCTTATTAGACTGGAACACGCGATACGACATTATATGTGGAATAGCTAGAGGACTTCATTATCTGCATCATGATTCAAGACTCAGGATTATCCATAGGGATCTCAAGACAAGCAACATACTACTTGACAGTGAAATGAATCCGAAAATATCAGACTTTGGGATAGCTAGAATATTTGGACAAAATCAAACAGAAGCAAATACATTGAGAGTTGTCGGAACATATGGCTATATGTCTCCTGAATATGCTATGGACGGAAACTTCTCAGTAAAATCAGATGTATTTAGCTTTGGAGTTCTTGTGCTAGAGATTATAAGTGGAAAGAAAAATAGAGGATTCTGTTACACAAATGATGATATGAATCTTCTAAAAAATGTACGCGAGAGCGATTCTTCAATTAGAATACTATGA 1074 0.3566 MWFGVLFDIRSYSDGGQDLFVRLAASDIDNSGSTSGSQKKNHKAEIIGITISAVVIILGLGFIFCKRRKFLSKLNRNTDNRGSLQRSRDLLMNEVVVTSKRGGSSGKRDMDDLELPMFDFKIITMATNNFIEANKLGEGGFGIVYRGRLIEGQEIAVKRLSKTSGQGLEEFKNEVKLIARLQHRNLVRLLGCCIDKDEKLLVYEYMENRSLDSILFHKARKPLLDWNTRYDIICGIARGLHYLHHDSRLRIIHRDLKTSNILLDSEMNPKISDFGIARIFGQNQTEANTLRVVGTYGYMSPEYAMDGNFSVKSDVFSFGVLVLEIISGKKNRGFCYTNDDMNLLKNVRESDSSIRIL* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g2487 357 SMART serkin_6 130 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g2487 357 Gene3D Phosphorylase Kinase; domain 1 105 205 - -
Tpr2g2487 357 SUPERFAMILY Protein kinase-like (PK-like) 115 333 IPR011009 -
Tpr2g2487 357 Pfam Protein kinase domain 132 330 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g2487 357 ProSitePatterns Protein kinases ATP-binding region signature. 136 158 IPR017441 GO:0005524
Tpr2g2487 357 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-1 1 345 - -
Tpr2g2487 357 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 1 345 - -
Tpr2g2487 357 ProSitePatterns Serine/Threonine protein kinases active-site signature. 251 263 IPR008271 GO:0004672|GO:0006468
Tpr2g2487 357 CDD STKc_IRAK 136 349 - -
Tpr2g2487 357 ProSiteProfiles Protein kinase domain profile. 130 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g2487 357 Gene3D Transferase(Phosphotransferase) domain 1 206 356 - -
Tpr2g2487 357 Pfam Receptor serine/threonine kinase 85 120 IPR022126 GO:0004674
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g2487 Tpr-Chr2 29819746 29823744 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g2487 7 347 Receptor kinase-like Gene Family AT4G23190 47.887 2.63e-105 319
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Tpr2g2487 Pkinase 4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g2487 - - gmx:100802437 516.153