Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g2486 ATGATGATGTTCAAAACATACCAACAACAACAACAATGTTTACTTTTTTTGTTTTTGTTCTGTTTCCTCTGTTTCTGTTCTGTTTCCACACGTGCTGCTTCATCTTCAAGATTCAGTATCAAACATGGTGATTTCATTAGAGACAAAGAAGGTGAAGTTTTAGTCTCAGATGGTTTCAACTTTGTAATGGGTTTTTTCGGTTTTGAAAATTCTTCTTCTCGTTACGTTGGAATTTGGTACTATAACATTCCTGATTCTCAAGCTATTTGGGTTGCAAATAGAAACAAACCCATTAATGGAAAAGGTGGTTCTTTCACTATATCAACAAATGGTAATTTAGTTATCATAGATGGAAACAAAAAACAAATCTGGTCTACAAATGTTTCTGTTACTCACAACAATAAGAATAACTCTGAAGCTGTTCTTGGAGATGATGGTAATCTTGTTCTTTCAAATGGGAATGATGTTTTGTGGCAAAGTTTTGAGAATCCAACTGATACTTATGTTCCTGGTATGAAAGTTCCTGTGAATGGTAAAAAGAAAAGTTTTTTCTTTACTTCATGGAAATCAAGTACAGATCCTTCAGAAGGTAATCATACTATGGGAGTTGATCCAGAAGGGTTACCACCACAGATAGTAGTTTGGGAAGGAGAGAGAAGAATATGGAGAAGTGGTTATTGGGATGGTAGAATTTTCAATGGTGTTGATATGACAGGTAGTTTTCTTCATGGTTTTGTGCTTAATTGGGATAGTAATGGTAGGTCTTTTGTTTATAATGATAATGAGTTTAAGATAAATGGGACTAGTACAGTTAGGTTTCAGATTGGTTGGGATGGTATTGAAAGAGAGTTTATATGGAATCAAAATGAGAAACGTTGGAGTCAGATACAACAAGGGCCTCATAATCAGTGTGAGGTTTATAACTATTGTGGCGATTTTGCAGCTTGTGAATTGTCGGTTTCTGGTTCGGCTATTTGTAATTGTTTACAAGGGTTTGAACAAAAGGATAAGAAACACTGGTCAAGTGGGTGTGAGAGGATAACCGCGTTGAAGGGTGATCAGAGAAATGGGAATGATACTCGGGCGAATAATGTTGGCGAGGACAGTTTCTTCGACAGTAGAAGTATGAAGTTACCCGATTTCGCAAGTGTGGTAGATACTGAGGATTGTAAAGGTACTTGTTTGGGGAATGCTTCTTGTACTGCTTATGCACAAGTTATTGGTATTGGTTGTATGATTTGGTATAGAGATTTGGTTGACATTCAACACTTTAAACGCGGTGGAAGTACATTGCACATTCGTCTTGCTCATTCTGATTTAGGCGATGGAGGGAAAAACAACAGGATTATGATTGTAATAATATCAACTGTTCTAGCAGGACTAATCTGTCTAGGAATCATGGTATGCTTGGTATGGAGATACAAGAGAAAACTCAAAGTTTTGCCTATAGTTTCTTCAGCTTCATGTTGCAATGATAGTGACGTACTACCAGTCTTAGATGCACGTAAGAGCACAGAGATGTCGGCAGAAATATCAGGACCAGTTGAACTTGGTTTGGAAGGAAATCAACTAAGCGGAGCAGAGCTTCCATTTTACAATTTCAGCTGCATGTCAGTAGCCACCAACAATTTTTCTGAAGAAAATAAGCTCGGACAAGGCGGTTTCGGTCCTGTGTACAAGGGAAAGCTTCCGTCCGGAGAAGAAATAGCTGTCAAGAGGCTTTCTAGACGCTCCGGCCAAGGTTTAGAGGAGTTTAAAAATGAAATGATGTTGATTGCAAAACTGCAACATAGAAATCTGGTTAGACTAATGGGATGTTCTATTCAAGGGGATGAAAAGTTGCTTGTATACGAATTTATGCCGAACAAAAGCTTGGATTGCTTTATATTTGATCCTATCAGGCAAACACAATTAGATTGGGCGAGACGATATGAAATCATTGAAGGTGTTGCAAGAGGACTACTTTATCTGCATCGCGATTCAAGACTCAGAATAATTCATCGAGACCTAAAAGCAAGCAACATTTTGTTGGATGAAAACATGAACCCGAAAATATCAGACTTTGGCTTGGCCCGAATATTCGGTGGAAACCAGAGTGAGGCCAATACAGCTAGAGTTGTTGGTACATATGGTTATATGTCTCCTGAATATGCCATGGAAGGTCTATTTTCAGTCAAATCAGATGTATATAGTTTTGGCGTATTGCTACTAGAGATTTTGAGCGGCCGCAGAAACACTAGCTTTCGTCATTCAGATGATTCAAGTCTCATAGGATATGCGTGGAATCTTTGGAACGACCGTAGAGCAATGGAACTTGTAGATCCTTGCATTCGTGATTCGAGTCCTAAAAACAAAATATTGAGATGCATACAAATAGGGATGTTATGTGTACAAGATTCAGCAGCTCAAAGACCAAACATGGCCAACGTTGTGTTGATGCTTGAGAGTGAAGCAAAAACTCTTCCCATCCCTACGCAGCCTTTGATTACTTCGATGAGATACGAGGATAGAGTGTTTAACATGGATGGTCTTGATGTTTCAAATGATCTCACAGTAACAGTATTGGTAGGGAGATAG 2577 0.3849 MMMFKTYQQQQQCLLFLFLFCFLCFCSVSTRAASSSRFSIKHGDFIRDKEGEVLVSDGFNFVMGFFGFENSSSRYVGIWYYNIPDSQAIWVANRNKPINGKGGSFTISTNGNLVIIDGNKKQIWSTNVSVTHNNKNNSEAVLGDDGNLVLSNGNDVLWQSFENPTDTYVPGMKVPVNGKKKSFFFTSWKSSTDPSEGNHTMGVDPEGLPPQIVVWEGERRIWRSGYWDGRIFNGVDMTGSFLHGFVLNWDSNGRSFVYNDNEFKINGTSTVRFQIGWDGIEREFIWNQNEKRWSQIQQGPHNQCEVYNYCGDFAACELSVSGSAICNCLQGFEQKDKKHWSSGCERITALKGDQRNGNDTRANNVGEDSFFDSRSMKLPDFASVVDTEDCKGTCLGNASCTAYAQVIGIGCMIWYRDLVDIQHFKRGGSTLHIRLAHSDLGDGGKNNRIMIVIISTVLAGLICLGIMVCLVWRYKRKLKVLPIVSSASCCNDSDVLPVLDARKSTEMSAEISGPVELGLEGNQLSGAELPFYNFSCMSVATNNFSEENKLGQGGFGPVYKGKLPSGEEIAVKRLSRRSGQGLEEFKNEMMLIAKLQHRNLVRLMGCSIQGDEKLLVYEFMPNKSLDCFIFDPIRQTQLDWARRYEIIEGVARGLLYLHRDSRLRIIHRDLKASNILLDENMNPKISDFGLARIFGGNQSEANTARVVGTYGYMSPEYAMEGLFSVKSDVYSFGVLLLEILSGRRNTSFRHSDDSSLIGYAWNLWNDRRAMELVDPCIRDSSPKNKILRCIQIGMLCVQDSAAQRPNMANVVLMLESEAKTLPIPTQPLITSMRYEDRVFNMDGLDVSNDLTVTVLVGR* 859
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g2486 858 SMART serkin_6 544 790 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g2486 858 CDD B_lectin 51 164 IPR001480 -
Tpr2g2486 858 Pfam Protein tyrosine and serine/threonine kinase 547 812 IPR001245 GO:0004672|GO:0006468
Tpr2g2486 858 SMART ntp_6 365 435 IPR003609 -
Tpr2g2486 858 CDD PAN_AP_plant 363 436 - -
Tpr2g2486 858 SUPERFAMILY alpha-D-mannose-specific plant lectins 88 194 IPR036426 -
Tpr2g2486 858 Pfam S-locus glycoprotein domain 222 335 IPR000858 GO:0048544
Tpr2g2486 858 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 2 858 - -
Tpr2g2486 858 SUPERFAMILY Protein kinase-like (PK-like) 530 838 IPR011009 -
Tpr2g2486 858 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE 2 858 - -
Tpr2g2486 858 SMART blect_4 45 164 IPR001480 -
Tpr2g2486 858 Gene3D - 37 161 IPR036426 -
Tpr2g2486 858 ProSitePatterns Serine/Threonine protein kinases active-site signature. 665 677 IPR008271 GO:0004672|GO:0006468
Tpr2g2486 858 ProSiteProfiles Protein kinase domain profile. 544 829 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g2486 858 Gene3D Phosphorylase Kinase; domain 1 520 619 - -
Tpr2g2486 858 PIRSF SRK 8 858 IPR024171 GO:0004674
Tpr2g2486 858 Pfam D-mannose binding lectin 89 189 IPR001480 -
Tpr2g2486 858 CDD STKc_IRAK 550 815 - -
Tpr2g2486 858 ProSiteProfiles PAN/Apple domain profile. 365 436 IPR003609 -
Tpr2g2486 858 Gene3D Transferase(Phosphotransferase) domain 1 620 823 - -
Tpr2g2486 858 ProSiteProfiles Bulb-type lectin domain profile. 37 163 IPR001480 -
Tpr2g2486 858 Pfam PAN-like domain 366 421 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g2486 Tpr-Chr2 29805878 29809703 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g2486 441 827 Receptor kinase-like Gene Family AT4G23230 51.546 1.88e-132 408
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Tpr2g2486 PK_Tyr_Ser-Thr 9.2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g2486 - - aprc:113869342 1255.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g1817 3 16277086 16281355 Tpr2g2486 2 29805878 29809703 PCT
Tpr2g2486 2 29805878 29809703 Tpr3g1814 3 16252588 16260640 PCT