Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g2484 ATGTTACATATTTTATTCACCCTCTCAACCCTTTACATGATCAAAATTGGAGATGCTACTATGTACACAATTACATCCTCTCAATTCATCACAGATTCTCAAACTATAAGCTCAAACGACAGCACGTTCAAGTTTGGATTCTTTAGTCCCATAAACACAACAAATCGTTACGTAGGAATATGGTATCTCAATGAATCTGATATTGTATGGGTGGCCAACAGAGGAAAACCACTACAAGATTCTTCTGGTGTTGTCACCATTTCTGATGACAACACAAACCTTTTAGTACTGGATGGACAAAAACATGTTATGTGGTCATCCAATATATCAAATTTTAAATCAAATTCTAATGTTACTGCTCATCTCGAAAATACCGGAAACCTCGTCTTACAGGATGACAATACAGGCGCGATAATATGGGAGAGTTTCAAACATCCATCTAATGCATTCCTTCCAAGTTTGATAATTAGCAACGATCAAATAACAGGGGAAAGAATAAATGTTACTTCATGGAAAACTCCTTCTGATCCAGCTACTGGAAACTTCTCTGGTAGCGTTGAGCGTCTCCGTGTTCCTGAAATTTTCATATGGAACGAAACAAAGCCTTATTGGCGCTCAGGTCCATGGAATGGTCAAGTATTTATTGGTTTACCAAACAATTTGTTATATATTGCATATCTAGATGGATTCAGCGTTACAAGAGAAGATAGTGGAAGTCTTGTTAAGATCACATTTGCAATGCCAAATAGTTCTTACTTTGGAACTATTGTGGTGAGTTCCGACGGAAAAATTGTGTATACTGCATGGATGAATAGGATTCAAGTTGGGAAGCATGTTGTTCAACAAAATAAATGTGATGTTTATGGTATTTGTGGTCCTAATGGAAGCTGTGATTTTAAAAATTCGCCGATATGTACATGCTTGACAGGTTTTGAGCCAAAAAATGTGGACGAATGGAATCGACAAAATTGGACAAATGGGTGTGTGAGAAAGGCTTCACTACAGTGTGAGAGGGTGAAGAATAACGAGAGTGCGTTACCTGGTGAAGAAGATGGGTTTTTAAAACTACAGACGTCGAAACCACCAGATTTTGTAGAGCAATCATATATTACTGTTGATGCATGTAGAACTCAGTGTTTGAATAATTGTTCTTGTACTGCTTATGCATTTGATGCAGGAATTCAATGCTTGACTTGGAGTGGTAATTTAATTGACATAGTTAGATTGTCGAGTGAATAAGGCATTGATCTTTACATACGCCTAGCTTATTCAGAACTTGCTATAGATTCAGATGGGGAAAGAAATGTTACTACAGCAATAGTTATAGCTATAGTGATCGTGGCAACAATTATTGTTGTTTCTTGTGCCTATTTCTTTTGGTCTAAACGTTCAGGGAAAACACATCAAGAAAACCAAAGTGCAAGTCTAATCGGAGATGTAAACCAAGTTAAATTAGAGGACCTTCCCTTATTTGAGTTCAAGAACATTTCAACTGCAACAAATAACTTTGATTCAACTAATAAGATTGGCCAGGGTGGTTTTGGTTCTGTGTACAAGGGAGAGTTGCCAAATGGATTAGAAATAGCAGTGAAAAGACTTTCAAGAGCTTCAGGACAAGGTCTAGAAGAATTTATGAATGAAGTGATTGTGATATCAAAGCTTCAACATCGCAATCTTGTAAGACTTTTAGGTTGCTGCATTGAAGGGGAAGAAAAGATGTTGATCTATGAGTACATGCCTAATAACAGTTTAGATTTTTATCTATTTGACCCAGTAAAAAAGAAGCTTTTAGATTGGCAAAAACGGTTATGCATAATTGAAGGAATTTCTCGAGGACTACTTTATCTTCATAGAGATTCGAGATTAAGAATAATACACAGAGACCTAAAGCCGAGTAATATCTTGTTGGATGGAGAACTAAATCCCAAAATATCTGACTTTGGCATGGCTAGAATCTTTGGAGGTACCGAAAACGAGGGCAATACAAGAAGAATTGTGGGAACATACGGATACATGTCTCCAGAATATGCAATGGAAGGATTGTTTTCTGAGAAATCAGATGTTTTTAGCTTTGGAGTTTTGCTCCTCGAGATAATAAGTGGCAGGAAAAACACAAGTTTCCATAATCACGATCAAGCACTAAGCCTCTTAGGATATGCATGGAAACTATGGAATGAAGAGGAGATTATATCTTTGATTGATCCAGAAATATGTAATCCAGATTATGTAGATGACATTTTGAGATGCATACATATTGGACTTCTTTGTGTTCAAGAGATTGCAAAGGAGAGGCCTACTATGGCCACTGTTGTTTCAATGCTTAACAGCGAGATTGTTAAATTTCCTCGTCCGTGTCAACCTGCATTCATTCAAAGACAGACTGAGCATAAAGGAGAATCGTCGACTCAACAGAGTCGTGACTCGAATTCCACGAATGGTGTCACCATCACAAACTTGCAAGGAAGATAG 2469 0.373 MLHILFTLSTLYMIKIGDATMYTITSSQFITDSQTISSNDSTFKFGFFSPINTTNRYVGIWYLNESDIVWVANRGKPLQDSSGVVTISDDNTNLLVLDGQKHVMWSSNISNFKSNSNVTAHLENTGNLVLQDDNTGAIIWESFKHPSNAFLPSLIISNDQITGERINVTSWKTPSDPATGNFSGSVERLRVPEIFIWNETKPYWRSGPWNGQVFIGLPNNLLYIAYLDGFSVTREDSGSLVKITFAMPNSSYFGTIVVSSDGKIVYTAWMNRIQVGKHVVQQNKCDVYGICGPNGSCDFKNSPICTCLTGFEPKNVDEWNRQNWTNGCVRKASLQCERVKNNESALPGEEDGFLKLQTSKPPDFVEQSYITVDACRTQCLNNCSCTAYAFDAGIQCLTWSGNLIDIVRLSSE*GIDLYIRLAYSELAIDSDGERNVTTAIVIAIVIVATIIVVSCAYFFWSKRSGKTHQENQSASLIGDVNQVKLEDLPLFEFKNISTATNNFDSTNKIGQGGFGSVYKGELPNGLEIAVKRLSRASGQGLEEFMNEVIVISKLQHRNLVRLLGCCIEGEEKMLIYEYMPNNSLDFYLFDPVKKKLLDWQKRLCIIEGISRGLLYLHRDSRLRIIHRDLKPSNILLDGELNPKISDFGMARIFGGTENEGNTRRIVGTYGYMSPEYAMEGLFSEKSDVFSFGVLLLEIISGRKNTSFHNHDQALSLLGYAWKLWNEEEIISLIDPEICNPDYVDDILRCIHIGLLCVQEIAKERPTMATVVSMLNSEIVKFPRPCQPAFIQRQTEHKGESSTQQSRDSNSTNGVTITNLQGR* 823
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g2484 821 SMART ntp_6 348 420 IPR003609 -
Tpr2g2484 821 PIRSF SRK 1 821 IPR024171 GO:0004674
Tpr2g2484 821 SUPERFAMILY alpha-D-mannose-specific plant lectins 58 177 IPR036426 -
Tpr2g2484 821 SUPERFAMILY Protein kinase-like (PK-like) 488 799 IPR011009 -
Tpr2g2484 821 Gene3D - 16 144 IPR036426 -
Tpr2g2484 821 Pfam PAN-like domain 349 406 IPR003609 -
Tpr2g2484 821 Gene3D Phosphorylase Kinase; domain 1 461 577 - -
Tpr2g2484 821 Pfam S-locus glycoprotein domain 204 315 IPR000858 GO:0048544
Tpr2g2484 821 ProSitePatterns Protein kinases ATP-binding region signature. 508 530 IPR017441 GO:0005524
Tpr2g2484 821 Gene3D Transferase(Phosphotransferase) domain 1 578 780 - -
Tpr2g2484 821 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE 15 820 - -
Tpr2g2484 821 ProSiteProfiles PAN/Apple domain profile. 336 421 IPR003609 -
Tpr2g2484 821 SMART serkin_6 502 766 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g2484 821 CDD STKc_IRAK 508 774 - -
Tpr2g2484 821 CDD PAN_AP_plant 334 421 - -
Tpr2g2484 821 MobiDBLite consensus disorder prediction 791 821 - -
Tpr2g2484 821 MobiDBLite consensus disorder prediction 792 821 - -
Tpr2g2484 821 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 15 820 - -
Tpr2g2484 821 ProSiteProfiles Protein kinase domain profile. 502 788 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g2484 821 Pfam Protein tyrosine and serine/threonine kinase 505 773 IPR001245 GO:0004672|GO:0006468
Tpr2g2484 821 ProSitePatterns Serine/Threonine protein kinases active-site signature. 623 635 IPR008271 GO:0004672|GO:0006468
Tpr2g2484 821 SMART blect_4 27 146 IPR001480 -
Tpr2g2484 821 Pfam D-mannose binding lectin 68 172 IPR001480 -
Tpr2g2484 821 ProSiteProfiles Bulb-type lectin domain profile. 21 143 IPR001480 -
Tpr2g2484 821 CDD B_lectin 27 146 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g2484 Tpr-Chr2 29792899 29797738 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g2484 435 788 Receptor kinase-like Gene Family AT4G23230 54.802 2.08e-128 396
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Tpr2g2484 PK_Tyr_Ser-Thr 3.1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g2484 - - gmx:112998788 1115.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g2484 2 29792899 29797738 Tpr3g1817 3 16277086 16281355 PCT