Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g2483 ATGCAAGGGTTCTTTTTCATGTTCTTGTTCATCACTTCACTTTCTATTCTCATCACAATCTCAACCTCTACAGATACCTTAACCTCATCACAAATTCTCACAACAAACCAGACTCTTGAATCATCCTATGAAACATTCGTTCTTGGTTTCATCCCCGGAACAAATTCAAACATTTATTTAGCCATATGGTACAAAAACATCGACCCCAGAACAGTTGTTTGGGTCGCAAACAGAGACCACCCTCTTCAAAATAATTCAACCAATGATGGCTTTCTCAAAATTGGTGACAATGGAAACATAGTACTTCTCAATTCATCATCAAACAACAACCTCGTATGGTCTTCAAATCAAACAACAGTTACTAAAAACCAACTTGTTCTTCAGCTTTTGGATCATGGAAATTTAGTTCTAAGAGAAACAAACGTGAACGACCCAACAAAATATCTATGGCAAAGCTTTGATTTTCCCACAGATACTTTGTTACCATCCATGAACATGGGTTGGAACTTCGACAAAAACACCGAAAAGCATTTAACTTCATGGAAGATCACAGGTGAAGATCCTTCAACAGGTGATTATTCATTCAAAATTGATTTTCATGGTTTGCCAGAAATTTTCCTATGGAATGATGAAAATATTATATATCGAAGTGGACCTTGGAATGGTGAAAGATTTAGTGGTGTACCGGAGATGGAACAAGATACAGATTCATTAGTTTTCGATTTTTCATCGAATGAACACGGTGTTAACTACCTGTTTATGATCGGAAATCCATCAATTTTCTCGCTACTGGTGGTGGATTCGTCTGGTGTACTTCAACGTCGAACTTGGGTTGAAAGTAGTAAAACTTGGACAACTTTTTGGTATGCACCGAAAGATCAATGTGATGATTACAAAGAGTGTGGTCCATATAGTGTTTGTGACACTAATGCTAATCCGTTTTGTGTATGTGTGAAAGGTTTTAGTCCTAAGAATGAACAAGCATGGAAATTGAGAGATGGATCAGATGGGTGTGTGAGGAATATAAATTTGGATTGTGAGAGTGATAAATTTTATCATATGGAGAATGTGAAGTTACCTGAGACAAGTTCTGTGTTTGTGAACATGACAATGGGAATTGATGAATGTGGTGACTTGTGTCATAGGAATTGTTCATGTAGTGGTTATGCTAATGTTTATATTACTAATGGTGGAAGTGGTTGTGTTATGTGGTTTGGTGAACTTGTTGATATAAGAAGTTATTCTGATGTTGGACAAGATCTTTTTGTTAGATTAGCAGCTTCTGAGATAGCTACTGTTACACCAGCTATAGACACAAATGGGAAGAGAAATGTTACACCAATCATCATAGCTACTGTGATAGTAGCAACAATTATTATTGCTGCTTGTACCTATTTCTTATGGTCATGGGCTTCTAAACGTTCAGCCGGTTCAGGGCAAACCCCTCAAGAAAACCAAAGTGCAAGTCTAATTAGAGATGTTAAACAAGTTAAAATAGAGGACCTTCCTTTATTTGAGTTCAAAAACATATCAACTGCAACAAATAACTTCAGTTCAGCTAATAAGATTGGACAAGGTGGTTTTGGTTCAGTGTACAAGGGAGAGTTACCAGATGGATTAGAAATAGCAGTGAAAAGACTTTCAAGAGCTTCAGGACAAGGTCTAGAAGAATTTATGAATGAAGTGATCGTGATTTCAAAGCTTCAACATCGCAATCTTGTAAGACTTTTAGGCTGCTGCATTGAAGGAGAAGAAAAGATGTTGGTTTATGAGTACATGCCTAATAACAGTTTAGATTTTTATCTATTTGACCCAATAAAAAAGAAGGTTTTAGATTGGCAAAAACGTTTATACATAATCGAAGGAATCTCTCGAGGTCTGCTTTATCTTCATAGAGATTCAAGATTAAGAATAATACACAGAGACCTAAAACCAGGTAATATCTTGTTGGATGGAGAATTGAATCCAAAAATATCTGACTTTGGCATGGCCAGAATCTTTGGAGGTACCGAAAACGAGTGCAATACAAGAAGAATTGTGGGAACATATGGATACATGTCTCCGGAGTATGTAATGGAAGGACTGTTTTCAGAGAAATCAGATGTTTTTAGCTTTGGAGTTTTGCTCCTCGAGATAATAAGTGGCAGGAAAAACACAAGTTTCTATAATCACGAGCAAGCACTCAGCCTCTTAGGATATGCATGGAAACTATGGAATGAAGATGAGGTTGTATCTTTGATAGATCCTCAAATATGTAATCCAGAATATTTGGATGACATTTTGAGATGCATACATATTGGACTTCTTTGTGTGCAAGAGATTGCGAAGGAGAGGCCTACTATGGCCACAGTTGTTTCAATGCTTAATAGTGAGATTGTTAAATTTCCTCGTCCATTTCAACCTGGATTCATTCAAAGACAGATTGAGCGTAGAGGCGAGCCATCGCTAAACCGTGTCACTGTCACAAGCTTGCAAGGCAGATGA 2484 0.3716 MQGFFFMFLFITSLSILITISTSTDTLTSSQILTTNQTLESSYETFVLGFIPGTNSNIYLAIWYKNIDPRTVVWVANRDHPLQNNSTNDGFLKIGDNGNIVLLNSSSNNNLVWSSNQTTVTKNQLVLQLLDHGNLVLRETNVNDPTKYLWQSFDFPTDTLLPSMNMGWNFDKNTEKHLTSWKITGEDPSTGDYSFKIDFHGLPEIFLWNDENIIYRSGPWNGERFSGVPEMEQDTDSLVFDFSSNEHGVNYLFMIGNPSIFSLLVVDSSGVLQRRTWVESSKTWTTFWYAPKDQCDDYKECGPYSVCDTNANPFCVCVKGFSPKNEQAWKLRDGSDGCVRNINLDCESDKFYHMENVKLPETSSVFVNMTMGIDECGDLCHRNCSCSGYANVYITNGGSGCVMWFGELVDIRSYSDVGQDLFVRLAASEIATVTPAIDTNGKRNVTPIIIATVIVATIIIAACTYFLWSWASKRSAGSGQTPQENQSASLIRDVKQVKIEDLPLFEFKNISTATNNFSSANKIGQGGFGSVYKGELPDGLEIAVKRLSRASGQGLEEFMNEVIVISKLQHRNLVRLLGCCIEGEEKMLVYEYMPNNSLDFYLFDPIKKKVLDWQKRLYIIEGISRGLLYLHRDSRLRIIHRDLKPGNILLDGELNPKISDFGMARIFGGTENECNTRRIVGTYGYMSPEYVMEGLFSEKSDVFSFGVLLLEIISGRKNTSFYNHEQALSLLGYAWKLWNEDEVVSLIDPQICNPEYLDDILRCIHIGLLCVQEIAKERPTMATVVSMLNSEIVKFPRPFQPGFIQRQIERRGEPSLNRVTVTSLQGR* 828
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g2483 827 ProSiteProfiles Bulb-type lectin domain profile. 24 150 IPR001480 -
Tpr2g2483 827 Pfam S-locus glycoprotein domain 215 325 IPR000858 GO:0048544
Tpr2g2483 827 SMART serkin_6 517 781 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g2483 827 SUPERFAMILY Protein kinase-like (PK-like) 502 788 IPR011009 -
Tpr2g2483 827 ProSitePatterns Protein kinases ATP-binding region signature. 523 545 IPR017441 GO:0005524
Tpr2g2483 827 PANTHER - 14 823 - -
Tpr2g2483 827 Gene3D Transferase(Phosphotransferase) domain 1 593 795 - -
Tpr2g2483 827 Gene3D Phosphorylase Kinase; domain 1 478 592 - -
Tpr2g2483 827 PIRSF SRK 1 827 IPR024171 GO:0004674
Tpr2g2483 827 CDD PAN_AP_plant 343 426 - -
Tpr2g2483 827 SUPERFAMILY alpha-D-mannose-specific plant lectins 71 222 IPR036426 -
Tpr2g2483 827 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 14 823 - -
Tpr2g2483 827 Pfam Protein tyrosine and serine/threonine kinase 520 788 IPR001245 GO:0004672|GO:0006468
Tpr2g2483 827 CDD B_lectin 31 156 IPR001480 -
Tpr2g2483 827 Pfam PAN-like domain 346 411 IPR003609 -
Tpr2g2483 827 Gene3D - 18 153 IPR036426 -
Tpr2g2483 827 SMART blect_4 30 156 IPR001480 -
Tpr2g2483 827 Pfam D-mannose binding lectin 71 182 IPR001480 -
Tpr2g2483 827 ProSiteProfiles Protein kinase domain profile. 517 793 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g2483 827 SMART ntp_6 346 425 IPR003609 -
Tpr2g2483 827 CDD STKc_IRAK 523 789 - -
Tpr2g2483 827 ProSiteProfiles PAN/Apple domain profile. 346 426 IPR003609 -
Tpr2g2483 827 ProSitePatterns Serine/Threonine protein kinases active-site signature. 638 650 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g2483 Tpr-Chr2 29776033 29786516 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g2483 449 803 Receptor kinase-like Gene Family AT4G23230 54.648 7.35e-127 392
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Tpr2g2483 PK_Tyr_Ser-Thr 2.4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g2483 - - gmx:100802437 955.281