Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g2482 ATGCAAGGTTTATTCTTCTTCTTGTTCATGAATTCACTATCTTTTCTCACCACAATCTCAACCTCTACGGATACCCTAACCTCGTCACAAATTCTGAGAACATCTCAGACCCTCGAATCGTCCAACGAAACTTTCGTTCTTGGTTTCATCCCCGGAATAAATCTCAACAACTTTTATTTAGCCATATGGTACAAAAACAGCCAAGACACAGTTGTTTGGGTTGCAAACAGAGACAACCCTCTTCAAAATAATTCAACCAATGATGGCTTTCTCAAAATTGGTGACAATGGAAACATAGTACTTCTCAATTCATCATCAAACAACAACCTCGTATGGTCTTCGAATCAAACAACAGTTACTAAAAACCAACTTGTTCTTCAGCTTTTGGATAATGGAAATTTAGTTCTAAGAGAAACAAACGTGAACGACCCAACAAAATATCTATGGCAAAGCTTTGATTTTCCCACAGATACTTTGTTACCATCCATGAACTTGGGTTGGAACTTCGAGAAAAACACCGAAAAACACTTAACTTCATGGAAGATCACAGGTCAAAACCCTTCAACAGGAGATTATTCATACAAAATTGATTTTCATGGCTTACCAGAAACTTTCCTGGTTGGTAGTGATAGATCATTAATGTATCGTGGTGGACCTTGGAATGGTGAAACATTCAGCGGTCTACCAGAAGCTAAGATGCAAGAAGATACAGATTCAATAGTTTTTAATTTTTCATGGAACGAACACGGTGTTTACTACTCATTTTCGACCATAAATGGGTCAATTTATTCGAGACTTGTTCTGAATTCGTACGGTCAACTTCAACATTTTACTTGGAATCAAAGCACAAAAACTTGGACTACGAAGTATTTGTATGTATTTTTATCAGATGATTGTGATCAGTACAGAAAATGTGGCCCTTATAGTATATGTGGCGCGCATGCTTCCCCTGTTTGTAAATGTATGAAAGGTTTTGTTCCTAAGAATGAACGAACATGGAATGTGAACGATTTTGAGTCTGATGGTTGTGTGAGGAAAACGAATTTGGATTGTAAGAGTGATGAGTTTTATCAAATGGTGAATGTGAAGTTGCCTGAGACAACCAAAACCCCTGTTTTTGTGAATACAACAATGGGGATTAAGGAATGTGGTGATTTGTGTCGTAGGAATTGTTCTTGTACTGGTTATGCTAACATTTTTGTGACGAATGGAGGAAGTGGTTGTGTTATGTGGTTTGGTGAACTTGTTGATATCATAAACTATACTAAAGGTGGACAAGATCTCTACATACGTCAAGCTTATTCAAAACTTGATATAGATACAGATGAGAAAACAAATGGAACAGCAATTACCATATCTATAGTGATAGTGGCAACGATTATTGTTGCTACTTGTACCTATTTCTTATGGTCATGGGCTTCTAAACACTCAGAATTATCTAGCTTCCACTTTCAATTATTTGTGTTGACCACAGGGAAATCCCCTCAAGAAAATCAAACTGCAAGTCTAATTGGAGATGTGAAACAAGTTAAAATAGAGGACCTTCCTTTATTTGAGTTCAAAAACATATCAACAGCAACAAATAACTTTAGTTCAGCTAATAAGATTGGACAAGGTGGTTTTGGTTCAGTGTACAAGGGAGAATTGCCGGATGGATTAGAAATAGCAGTGAAAAGACTTTCAAGAGATTCAGGACAGGGGCTAGAAGAATTTATGAATGAAGTGATTGTGATTTCAAAGCTTCAACATCGCAATCTTGTAAGACTTTTAGGCTGCTGCATCGAAGAAGAAGAAAAGATGTTGGTTTATGAGTACATGCCTAATAACAGTTTAGATTTTTACCTATTTGACCCAATAAAAAAGAAGGTTTTAGATTGGCAAAAACGTTTATACGTAATCGAAGGAATCTCTCGAGGTCTACTTTATCTTCATAGAGATTCGAGGTTAAGAATAATACACAGAGACCTAAAACCAAGTAATATCTTGTTGGATGGAGAATTGAATCCAAAAATATCTGACTTTGGCATGGCCAGAATCTTTGGAGGTACCGAAAACGAGTGCAATACAAGAAGAATTGTGGGAACATATGGATACATGTCTCCAGAGTATGCAATGGAAGGACTATTTTCAGACAAATCAGATGTTTTTAGCTTTGGAGTTTTGCTCCTCGAGATAATAAGCGGTAGGAAAAACACAAGTTTATATAATCACGAGCAAACACTCAACCTCTTAGGATATGCATGGAAACTATGGAATGAAGATGAGGTTGTATCTTTGATAGATCCTCAAATATGTAATCCAGAATATTTGGATGACATTTTGAGATGCATACATATTGGACTTCTTTGTGTTCAAGAAATTGCGAAGGAGAGGCCTACTATGGCAACAGTTGTATCAATGCTTAATAGTGAGATTGTTAAATTTCCTCGTCCATTTCAACCTGGATTCATTCAAAGACAGATTGAGCGTAGAGGCGAGCCATCGCTAAACCGTGTCACTGTCACAAGCTTGCAAGGCAGATGA 2523 0.3698 MQGLFFFLFMNSLSFLTTISTSTDTLTSSQILRTSQTLESSNETFVLGFIPGINLNNFYLAIWYKNSQDTVVWVANRDNPLQNNSTNDGFLKIGDNGNIVLLNSSSNNNLVWSSNQTTVTKNQLVLQLLDNGNLVLRETNVNDPTKYLWQSFDFPTDTLLPSMNLGWNFEKNTEKHLTSWKITGQNPSTGDYSYKIDFHGLPETFLVGSDRSLMYRGGPWNGETFSGLPEAKMQEDTDSIVFNFSWNEHGVYYSFSTINGSIYSRLVLNSYGQLQHFTWNQSTKTWTTKYLYVFLSDDCDQYRKCGPYSICGAHASPVCKCMKGFVPKNERTWNVNDFESDGCVRKTNLDCKSDEFYQMVNVKLPETTKTPVFVNTTMGIKECGDLCRRNCSCTGYANIFVTNGGSGCVMWFGELVDIINYTKGGQDLYIRQAYSKLDIDTDEKTNGTAITISIVIVATIIVATCTYFLWSWASKHSELSSFHFQLFVLTTGKSPQENQTASLIGDVKQVKIEDLPLFEFKNISTATNNFSSANKIGQGGFGSVYKGELPDGLEIAVKRLSRDSGQGLEEFMNEVIVISKLQHRNLVRLLGCCIEEEEKMLVYEYMPNNSLDFYLFDPIKKKVLDWQKRLYVIEGISRGLLYLHRDSRLRIIHRDLKPSNILLDGELNPKISDFGMARIFGGTENECNTRRIVGTYGYMSPEYAMEGLFSDKSDVFSFGVLLLEIISGRKNTSLYNHEQTLNLLGYAWKLWNEDEVVSLIDPQICNPEYLDDILRCIHIGLLCVQEIAKERPTMATVVSMLNSEIVKFPRPFQPGFIQRQIERRGEPSLNRVTVTSLQGR* 841
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g2482 840 Gene3D Phosphorylase Kinase; domain 1 492 605 - -
Tpr2g2482 840 PANTHER - 13 836 - -
Tpr2g2482 840 Pfam D-mannose binding lectin 70 181 IPR001480 -
Tpr2g2482 840 CDD B_lectin 30 155 IPR001480 -
Tpr2g2482 840 ProSitePatterns Protein kinases ATP-binding region signature. 536 558 IPR017441 GO:0005524
Tpr2g2482 840 SMART ntp_6 351 432 IPR003609 -
Tpr2g2482 840 Pfam PAN-like domain 351 418 IPR003609 -
Tpr2g2482 840 ProSiteProfiles Bulb-type lectin domain profile. 23 149 IPR001480 -
Tpr2g2482 840 SUPERFAMILY alpha-D-mannose-specific plant lectins 71 181 IPR036426 -
Tpr2g2482 840 ProSitePatterns Serine/Threonine protein kinases active-site signature. 651 663 IPR008271 GO:0004672|GO:0006468
Tpr2g2482 840 ProSiteProfiles PAN/Apple domain profile. 351 433 IPR003609 -
Tpr2g2482 840 Gene3D - 17 152 IPR036426 -
Tpr2g2482 840 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 13 836 - -
Tpr2g2482 840 CDD PAN_AP_plant 347 431 - -
Tpr2g2482 840 SUPERFAMILY Protein kinase-like (PK-like) 515 801 IPR011009 -
Tpr2g2482 840 ProSiteProfiles Protein kinase domain profile. 530 806 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g2482 840 SMART serkin_6 530 794 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g2482 840 Gene3D Transferase(Phosphotransferase) domain 1 606 808 - -
Tpr2g2482 840 SMART blect_4 29 155 IPR001480 -
Tpr2g2482 840 CDD STKc_IRAK 536 802 - -
Tpr2g2482 840 Pfam Protein tyrosine and serine/threonine kinase 533 801 IPR001245 GO:0004672|GO:0006468
Tpr2g2482 840 PIRSF SRK 1 840 IPR024171 GO:0004674
Tpr2g2482 840 Pfam S-locus glycoprotein domain 215 329 IPR000858 GO:0048544
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g2482 Tpr-Chr2 29760489 29765255 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g2482 518 836 Receptor kinase-like Gene Family AT3G45860 56.075 5.51e-124 387
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Tpr2g2482 PK_Tyr_Ser-Thr 3.6e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g2482 - - gmx:106799702 886.715