Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g2480 ATGTTAGGACTCAATAATGTGCAAGGTAACATGTTACATATTTTATTCACTCTCTCGACCCTTTGCACTATATTGAACATTGGCACTGCTTCTGTGAATACAATTACAAAGTCTCAAATATTGATCAAAGATTCTGAAACTATAAGCTCTGCGGACGGCGCATTCAAGCTTGGATTCTTCAGCCCCATCAACACAACAAATCGCTACGTAGGAATATGGTATGTCACTGAATCCAACGTCGTATGGGTAGCCAACAGAGAAACACCATTACATGATTTTTCCGGTGTTGTCATCATATCTGATGACAACACAAACCTTTTAGCACTAAATGGACAAAAACATATTATATGGTCATCAAATGTCTCAAATATTGTACCAAATTTTAATGTCACTGTTCAGCTTCAAAATACTGGAAATCTCGTCTTGCAGGAAGACACTACAGACAGGATAATATGGTCGAGTTTTAATCATCCAACTGATACATTCATTCCGAATATCATAATAAGCACAAACCAAATAACAGGAGAAAGAGTAGAAGCTACTTCATGGAAAAGTCCTTCTGATCCAGCTATTGGAAACTTTACTGGCGGCCTTGAGCGTCTCAGTGCTCCTGAAATTTTTATATGGAACCAAAAACAACCTCATTGGCGTTCGGGTCCATGGAATGGTCAAGCTTTTCTTGGTTTGAGAACAAATTTGTTGTCTACTTCTGCATATCTAAATGGATTTACCTTTACAAGAAAAGATAATGGAAGTCTTGTTGAGATTACATATACATTGCCAAATAGTTCTTACTTTGGAACCCTTGTGGTGAGTTATGAAGGAAACCTTGTGTATACTGCATGGATCAATAGGATTCAAGTTAGGAAAAGGGTTGTTCAACAAAACGAATGTGATGTTTATGGTATTTGTGGTCCTAATGGAAGCTGTGATTTTAAAGATTCGGCGCCAATATGTACATGTTTGAAAGGTTTTGAGCCAAAAAATGCCGACGAATGGAATAGACTAATATGGATAAATGGGTGTGTGAGAAGAGCATCACTAAAGTGTGAGAGGGTGAAAAATAATAGGAGTGCATTAGATGGTGAAGAAGACGGGTTTATAAAACTACAGACGACAAAACCACCGGATTTTGTTGAGCAATCATATCTTTCTGAGGATGCATGTAGAGCTCGGTGCTTGAATGATTGTAATTGCACAGCTTATGGATTTGATAATGGAATTCAGTGCTTGATTTGGAGTGGTAAATTAATTGACATAGTAAGGTTTACAAGTGGCGGCATCGATCTTTTCATACGCCAAGCTTATTCAGAACTTGCATCTATACAAACAAATGAGATTCATGGGAAGAAAAATGTTACACCAATCATCATCGCTACTGTGACAGTGGGTGCAATTATTGTTGCTACTTGTGCTTATTTCTTTTGGTCATGGTCTTCTAAACGTTCAGGGCAAACCAATCAAGAAAACCAAATTGCAAATCTAAGTGGAGATGTGAAACAAGTTAAAATAGAGGACCTTCCTTTATTTGAGTTCAAAAACATTTCAACAGCAACAAATAACTTTAGTTCAGCTAATAAGATTGGACATGGTGGTTTTGGTTCAGTGTACAAGGGAGAATTGCCAGATGGATTAGAAATAGCAGTAAAAAGACTTTCAAGAACATCAGGACAAGGTCTTGAAGAGTTTATGAATGAAGTGATTGTGATTTCAAAGCTTCAACATCGCAATCTTGTAAGACTTTTAGGGTGCTGCATTGAAGGAGAAGAAAAGATGTTGGTCTATGAGTACATGCCTAATAACAGTTTAGATTTTTATCTATCTGACCCAGTAAAAAAGAAGATTTTAGATTGGCAAAAACGGCTATATATAATTCAAGGAATCTCTCGAGGATTGCTTTATCTTCATAGAGATTCGAGATTGAGAATAATACACAGAGACCTAAAGCTGAGTAATATCTTGTTGGATATAGAGTTGAATCCAAAAATATCCGACTTTGGTATGGCTAAAATCTTTGGAAGTAGCGAAAATGAGGGAAATACAAGAAGGATTATGGGAACATATGGATACATGTCTCCAGAATATGCAATGGAAGGATTGTTTTCAGAGAAATCAGATGTTTTTAGCTTTGGAGTTTTACTCCTCGAAATAATAAGTGGTAGGAAAAACACAAGTTTCTATAATCACGATCAAGCACTTAGCCTCTTAGGATATGCATGGAAACTATGGAATGAAGAGGAGATTATATCTTTGATTGATCCAGAAATATGTAATCCAGATTATGTAGATGAAATTTTGAGATGCATACATATTGGACTTCTTTGTGTTCAAGAAATTGCAAAGGAGAGGCCTACTATGGCAACAGTTGTATCAATGCTTAACAGTGAGATTGTTAAATTTCCTCGTCCATCTCAACCTGCATTCATTCAAAGACACACTGAGCATAAAGGAGAGTCGTCTCAGTCTCAACAGAGTCATGACTCGAATTCGAGGAATAGTGTCACTATCACAAACTTGGAAGGCAGATAA 2529 0.3677 MLGLNNVQGNMLHILFTLSTLCTILNIGTASVNTITKSQILIKDSETISSADGAFKLGFFSPINTTNRYVGIWYVTESNVVWVANRETPLHDFSGVVIISDDNTNLLALNGQKHIIWSSNVSNIVPNFNVTVQLQNTGNLVLQEDTTDRIIWSSFNHPTDTFIPNIIISTNQITGERVEATSWKSPSDPAIGNFTGGLERLSAPEIFIWNQKQPHWRSGPWNGQAFLGLRTNLLSTSAYLNGFTFTRKDNGSLVEITYTLPNSSYFGTLVVSYEGNLVYTAWINRIQVRKRVVQQNECDVYGICGPNGSCDFKDSAPICTCLKGFEPKNADEWNRLIWINGCVRRASLKCERVKNNRSALDGEEDGFIKLQTTKPPDFVEQSYLSEDACRARCLNDCNCTAYGFDNGIQCLIWSGKLIDIVRFTSGGIDLFIRQAYSELASIQTNEIHGKKNVTPIIIATVTVGAIIVATCAYFFWSWSSKRSGQTNQENQIANLSGDVKQVKIEDLPLFEFKNISTATNNFSSANKIGHGGFGSVYKGELPDGLEIAVKRLSRTSGQGLEEFMNEVIVISKLQHRNLVRLLGCCIEGEEKMLVYEYMPNNSLDFYLSDPVKKKILDWQKRLYIIQGISRGLLYLHRDSRLRIIHRDLKLSNILLDIELNPKISDFGMAKIFGSSENEGNTRRIMGTYGYMSPEYAMEGLFSEKSDVFSFGVLLLEIISGRKNTSFYNHDQALSLLGYAWKLWNEEEIISLIDPEICNPDYVDEILRCIHIGLLCVQEIAKERPTMATVVSMLNSEIVKFPRPSQPAFIQRHTEHKGESSQSQQSHDSNSRNSVTITNLEGR* 843
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g2480 842 SUPERFAMILY Protein kinase-like (PK-like) 508 823 IPR011009 -
Tpr2g2480 842 MobiDBLite consensus disorder prediction 811 842 - -
Tpr2g2480 842 MobiDBLite consensus disorder prediction 822 842 - -
Tpr2g2480 842 Pfam Protein tyrosine and serine/threonine kinase 525 793 IPR001245 GO:0004672|GO:0006468
Tpr2g2480 842 ProSiteProfiles EGF-like domain profile. 294 331 IPR000742 -
Tpr2g2480 842 CDD PAN_AP_plant 361 433 - -
Tpr2g2480 842 ProSitePatterns Protein kinases ATP-binding region signature. 528 550 IPR017441 GO:0005524
Tpr2g2480 842 Gene3D Transferase(Phosphotransferase) domain 1 598 801 - -
Tpr2g2480 842 Pfam D-mannose binding lectin 80 184 IPR001480 -
Tpr2g2480 842 ProSitePatterns Serine/Threonine protein kinases active-site signature. 643 655 IPR008271 GO:0004672|GO:0006468
Tpr2g2480 842 CDD STKc_IRAK 528 794 - -
Tpr2g2480 842 Gene3D Phosphorylase Kinase; domain 1 481 597 - -
Tpr2g2480 842 SMART serkin_6 522 798 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g2480 842 SMART ntp_6 362 434 IPR003609 -
Tpr2g2480 842 CDD B_lectin 41 158 IPR001480 -
Tpr2g2480 842 ProSiteProfiles PAN/Apple domain profile. 350 435 IPR003609 -
Tpr2g2480 842 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 26 840 - -
Tpr2g2480 842 SMART blect_4 39 158 IPR001480 -
Tpr2g2480 842 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE 26 840 - -
Tpr2g2480 842 Pfam S-locus glycoprotein domain 216 329 IPR000858 GO:0048544
Tpr2g2480 842 Pfam PAN-like domain 363 420 IPR003609 -
Tpr2g2480 842 ProSiteProfiles Protein kinase domain profile. 522 808 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g2480 842 SUPERFAMILY alpha-D-mannose-specific plant lectins 70 189 IPR036426 -
Tpr2g2480 842 Gene3D - 28 156 IPR036426 -
Tpr2g2480 842 ProSiteProfiles Bulb-type lectin domain profile. 32 155 IPR001480 -
Tpr2g2480 842 PIRSF SRK 6 842 IPR024171 GO:0004674
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g2480 Tpr-Chr2 29743745 29748380 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g2480 451 832 Receptor kinase-like Gene Family AT4G05200 50.000 6.48e-128 397
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Tpr2g2480 PK_Tyr_Ser-Thr 4.9e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g2480 - - gmx:112998788 1107.82